RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 VWC2Q2TAL6 325 aa12.86□□□□□ -0.35
PCM1-204ENST00000517730 ARSJQ5FYB0 599 aaPredicted RBP12.86□□□□□ -0.35
PCM1-204ENST00000517730 SLC25A45Q8N413 288 aa12.86□□□□□ -0.35
PCM1-204ENST00000517730 NPCDR1Q9BY65 106 aa12.86□□□□□ -0.35
PCM1-204ENST00000517730 ZDHHC11Q9H8X9 412 aa12.86□□□□□ -0.35
PCM1-204ENST00000517730 WDR87Q6ZQQ6 2873 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 MDFIC2A0A1B0GVS7 189 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 KRASP01116 189 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 SSR4P51571 173 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 GNB1P62873 340 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 PMP22Q01453 160 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 Q6ZWC4 215 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 SFRP2Q96HF1 295 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 GMPPAQ96IJ6 420 aaPredicted RBP12.85□□□□□ -0.35
PCM1-204ENST00000517730 DIRC2Q96SL1 478 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 TXNDC17Q9BRA2 123 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 VAMP8Q9BV40 100 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 OR2J1Q9GZK6 312 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 SH2D2AQ9NP31 389 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 DLL3Q9NYJ7 618 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 PLA2G3Q9NZ20 509 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 LOC102723996A0A087X1L8 192 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 SYNGR1O43759 233 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 UMODP07911 640 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 CCL7P80098 99 aa12.85□□□□□ -0.35
PCM1-204ENST00000517730 LNP1A1A4G5 178 aa12.84□□□□□ -0.35
PCM1-204ENST00000517730 PMS2P5A8MQ11 134 aa12.84□□□□□ -0.35
PCM1-204ENST00000517730 G3V3Y1 287 aa12.84□□□□□ -0.35
PCM1-204ENST00000517730 IL6RP08887 468 aaPredicted RBP12.84□□□□□ -0.35
PCM1-204ENST00000517730 B3GALT5-AS1P59052 145 aa12.84□□□□□ -0.35
PCM1-204ENST00000517730 MRPL14Q6P1L8 145 aaKnown RBP12.84□□□□□ -0.35
PCM1-204ENST00000517730 FAM58AQ8N1B3 248 aa12.84□□□□□ -0.35
PCM1-204ENST00000517730 CIB3Q96Q77 187 aaPredicted RBP12.84□□□□□ -0.35
PCM1-204ENST00000517730 EML6Q6ZMW3 1958 aa12.84□□□□□ -0.35
PCM1-204ENST00000517730 SRD5A2P31213 254 aa12.84□□□□□ -0.35
PCM1-204ENST00000517730 COL5A1-AS1Q5SY13 56 aa12.84□□□□□ -0.35
PCM1-204ENST00000517730 RAB1CQ92928 201 aa12.84□□□□□ -0.35
PCM1-204ENST00000517730 APOBEC3DQ96AK3 386 aaPredicted RBP12.84□□□□□ -0.35
PCM1-204ENST00000517730 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.84□□□□□ -0.35
PCM1-204ENST00000517730 CRIM1Q9NZV1 1036 aa12.84□□□□□ -0.35
PCM1-204ENST00000517730 WDR1O75083 606 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 NDUFB4O95168 129 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 CELA2AP08217 269 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 KITLGP21583 273 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 TFF3Q07654 80 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 GGNQ86UU5 652 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 DRAM1Q8N682 238 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 SGCZQ96LD1 299 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 TNRC6BQ9UPQ9 1833 aaKnown RBP12.83□□□□□ -0.36
PCM1-204ENST00000517730 GALR2O43603 387 aaPredicted RBP12.83□□□□□ -0.36
PCM1-204ENST00000517730 CXCL13O43927 109 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 C1QTNF9P0C862 333 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 PCP4P48539 62 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 AGBL5Q8NDL9 886 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 HSPB9Q9BQS6 159 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 OPN3Q9H1Y3 402 aaPredicted RBP12.83□□□□□ -0.36
PCM1-204ENST00000517730 WDR54Q9H977 334 aa12.83□□□□□ -0.36
PCM1-204ENST00000517730 PATZ1Q9HBE1 687 aaKnown RBP12.83□□□□□ -0.36
PCM1-204ENST00000517730 ARHGAP21Q5T5U3 1957 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 IGHV1-45A0A0A0MS14 117 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 OR5B21A6NL26 309 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 LRRC30A6NM36 301 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 CRISP2P16562 243 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 ZBTB34Q8NCN2 500 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 OR5AU1Q8NGC0 362 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 ZFP30Q9Y2G7 519 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 CCNOP22674 350 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 CD82P27701 267 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 PLA2G5P39877 138 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 FBXO46Q6PJ61 603 aaPredicted RBP12.82□□□□□ -0.36
PCM1-204ENST00000517730 IMMP1LQ96LU5 166 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 CLN8Q9UBY8 286 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 TP53TG3Q9ULZ0 132 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 PAM16Q9Y3D7 125 aa12.82□□□□□ -0.36
PCM1-204ENST00000517730 TNRC6AQ8NDV7 1962 aaKnown RBP12.81□□□□□ -0.36
PCM1-204ENST00000517730 GRIFINA4D1Z8 144 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 CRYAAP02489 173 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 P0C879 139 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 SELEP16581 610 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 LHX2P50458 406 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 OR5I1Q13606 314 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 TDRG1Q3Y452 100 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 TCF23Q7RTU1 214 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 OR4B1Q8NGF8 309 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 OR10G8Q8NGN5 311 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 OR1L1Q8NH94 360 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 DTD1Q8TEA8 209 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 TMEM45BQ96B21 275 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 ZNF488Q96MN9 340 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 PKIBQ9C010 78 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 ZNF552Q9H707 407 aaPredicted RBP12.81□□□□□ -0.36
PCM1-204ENST00000517730 ABCA7Q8IZY2 2146 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 PRUNE2Q8WUY3 3088 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 ATP5G3P48201 142 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 GNG3P63215 75 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 YRDCQ86U90 279 aaKnown RBP12.81□□□□□ -0.36
PCM1-204ENST00000517730 OR10D3Q8NH80 312 aa12.81□□□□□ -0.36
PCM1-204ENST00000517730 AURKAIP1Q9NWT8 199 aaPredicted RBP12.81□□□□□ -0.36
PCM1-204ENST00000517730 TRAPPC2LQ9UL33 140 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms