RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SIGLECL1Q8N7X8 197 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 RAB1CQ92928 201 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 SRXN1Q9BYN0 137 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 RALGAPA1Q6GYQ0 2036 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 WISP1O95388 367 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 PNRC1Q12796 327 aaPredicted RBP9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 COTL1Q14019 142 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 CXorf66Q5JRM2 361 aaPredicted RBP9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 FAM122AQ96E09 287 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 NDFIP1Q9BT67 221 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 TMEM147Q9BVK8 224 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 CLDN16Q9Y5I7 305 aa9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 KLF2Q9Y5W3 355 aaPredicted RBP9.31□□□□□ -0.92
PCDHGA1-202ENST00000517417 XKRY2A2RUG3 117 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF785A8K8V0 405 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 RTP5Q14D33 572 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 C10orf91Q5T1B1 145 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 OR1L4Q8NGR5 311 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 B4DEV8 164 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 CA11O75493 328 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 AGAP20933 346 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 PRRX1P54821 245 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 PKIAP61925 76 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 KHDC3LQ587J8 217 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 TMEM18Q96B42 140 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 MESP1Q9BRJ9 268 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 KIF26AQ9ULI4 1882 aaPredicted RBP9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 CLDN14O95500 239 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 SNRPCP09234 159 aaKnown RBP9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 ERVS71-1P61550 626 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 TM2D1Q9BX74 207 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 RAB1BQ9H0U4 201 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 WFDC1Q9HC57 220 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 Q9N2K0 584 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 A0A1W2PN81 502 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 HSPB1P04792 205 aaKnown RBP9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 SLC25A5P05141 298 aaKnown RBP9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 HOXA6P31267 233 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 PRDX2P32119 198 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 KRTDAPP60985 99 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 RHOBP62745 196 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF880Q6PDB4 577 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 SLC23A3Q6PIS1 610 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 ABHD14BQ96IU4 210 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 TMEM222Q9H0R3 208 aa9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZFHX2Q9C0A1 2572 aaPredicted RBP9.3□□□□□ -0.92
PCDHGA1-202ENST00000517417 WIPF3A6NGB9 483 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 HSBP1O75506 76 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 LYL1P12980 280 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 GALR1P47211 349 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 RPL31P62899 125 aaKnown RBP9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 FAM78BQ5VT40 261 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF600Q6ZNG1 722 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 MS4A5Q9H3V2 200 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 SEBOXQ9HB31 216 aaPredicted RBP9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 CXorf65A6NEN9 183 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 GYPAP02724 150 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 CD82P27701 267 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 CEBPDP49716 269 aaPredicted RBP9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 BCL2L2Q92843 193 aaPredicted RBP9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 TP53RKQ96S44 253 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 MRPL13Q9BYD1 178 aaKnown RBP9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 LPAR2Q9HBW0 351 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 AURKAIP1Q9NWT8 199 aaPredicted RBP9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF586Q9NXT0 402 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 CLN8Q9UBY8 286 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 HSF4Q9ULV5 492 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 SLC45A2Q9UMX9 530 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 DOCK7Q96N67 2140 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 IGSF23A1L1A6 192 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 COL10A1Q03692 680 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 PPP1R32Q7Z5V6 425 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 TGIF2LYQ8IUE0 185 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 TGIF2LXQ8IUE1 241 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 OR52L2PQ8NGH6 319 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 NEIL1Q96FI4 390 aaPredicted RBP9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 FKBP11Q9NYL4 201 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 FOXJ2Q9P0K8 574 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 NAT8BQ9UHF3 227 aa9.29□□□□□ -0.92
PCDHGA1-202ENST00000517417 CCL21O00585 134 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 CELA3AP09093 270 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 HOXA5P20719 270 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 NPBWR2P48146 333 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 FGF12P61328 243 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 FAM89BQ8N5H3 189 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 OR10A7Q8NGE5 316 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 HARBI1Q96MB7 349 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 CCL13Q99616 98 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 DDA1Q9BW61 102 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 LYRM2Q9NU23 88 aaPredicted RBP9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 TRAPPC1Q9Y5R8 145 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 SLC35E3Q7Z769 313 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 ADTRPQ96IZ2 230 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF665Q9H7R5 613 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 SH2D2AQ9NP31 389 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 PI4KAP42356 2102 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 DOCK10Q96BY6 2186 aa9.28□□□□□ -0.92
PCDHGA1-202ENST00000517417 ZNF729A6NN14 1252 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms