RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CBX5P45973 191 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 C9orf152Q5JTZ5 239 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 C11orf88Q6PI97 169 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 GLDNQ6ZMI3 551 aaPredicted RBP11.11□□□□□ -0.63
USP46-209ENST00000514536 Q8N6K4 173 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 DRAXINQ8NBI3 349 aaPredicted RBP11.11□□□□□ -0.63
USP46-209ENST00000514536 DYNC2LI1Q8TCX1 351 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 SERTAD4Q9NUC0 356 aa11.11□□□□□ -0.63
USP46-209ENST00000514536 CCDC160A6NGH7 325 aa11.1□□□□□ -0.63
USP46-209ENST00000514536 CTDSP2O14595 271 aa11.1□□□□□ -0.63
USP46-209ENST00000514536 ARPC4P59998 168 aa11.1□□□□□ -0.63
USP46-209ENST00000514536 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
USP46-209ENST00000514536 C5orf56Q8N8D9 126 aa11.1□□□□□ -0.63
USP46-209ENST00000514536 OR2D2Q9H210 308 aa11.1□□□□□ -0.63
USP46-209ENST00000514536 IFT46Q9NQC8 304 aa11.1□□□□□ -0.63
USP46-209ENST00000514536 PLSCR3Q9NRY6 295 aa11.1□□□□□ -0.63
USP46-209ENST00000514536 TENM1Q9UKZ4 2725 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 M0R1X1 148 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 RGS5O15539 181 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 FGF16O43320 207 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 VDAC2P45880 294 aaPredicted RBP11.09□□□□□ -0.63
USP46-209ENST00000514536 F2RL1P55085 397 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 LINC00205P59089 165 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 FAM131AQ6UXB0 335 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 SNX29P2Q8IUI4 249 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 RITA1Q96K30 269 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 SDHAF2Q9NX18 166 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 GAB2Q9UQC2 676 aa11.09□□□□□ -0.63
USP46-209ENST00000514536 PEX14O75381 377 aa11.08□□□□□ -0.64
USP46-209ENST00000514536 Q8N9W7 124 aa11.08□□□□□ -0.64
USP46-209ENST00000514536 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.08□□□□□ -0.64
USP46-209ENST00000514536 SNAPC3Q92966 411 aa11.08□□□□□ -0.64
USP46-209ENST00000514536 CITED1Q99966 193 aa11.08□□□□□ -0.64
USP46-209ENST00000514536 MIXL1Q9H2W2 232 aa11.08□□□□□ -0.64
USP46-209ENST00000514536 CCDC59Q9P031 241 aaKnown RBP11.08□□□□□ -0.64
USP46-209ENST00000514536 EXTL2Q9UBQ6 330 aa11.08□□□□□ -0.64
USP46-209ENST00000514536 OR2W1Q9Y3N9 320 aa11.08□□□□□ -0.64
USP46-209ENST00000514536 H0YJW9 148 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 H7C2Y5 167 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 FCGR2CP31995 323 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 MC5RP33032 325 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 LUMP51884 338 aaPredicted RBP11.07□□□□□ -0.64
USP46-209ENST00000514536 ACTBP60709 375 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 ZNF383Q8NA42 475 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 OR5AP2Q8NGF4 316 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 OR8H1Q8NGG4 311 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 OR5AN1Q8NGI8 311 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 GPX8Q8TED1 209 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 C5orf30Q96GV9 206 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 RASL11BQ9BPW5 248 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 NECAP2Q9NVZ3 263 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 IGKV1D-13A0A0B4J2D9 117 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 OR5H14A6NHG9 310 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 TUSC2O75896 110 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 OR5H8P0DN80 308 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 IGKV1-13P0DP09 117 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 CNTFRP26992 372 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 CDK10Q15131 360 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 MMDQ15546 238 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 LAX1Q8IWV1 398 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 WNT10AQ9GZT5 417 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 ANAPC10Q9UM13 185 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 WASHC3Q9Y3C0 194 aa11.07□□□□□ -0.64
USP46-209ENST00000514536 PMP2P02689 132 aa11.06□□□□□ -0.64
USP46-209ENST00000514536 NAT1P18440 290 aa11.06□□□□□ -0.64
USP46-209ENST00000514536 AADACP22760 399 aa11.06□□□□□ -0.64
USP46-209ENST00000514536 HIST2H2BDQ6DRA6 164 aa11.06□□□□□ -0.64
USP46-209ENST00000514536 LYSMD2Q8IV50 215 aa11.06□□□□□ -0.64
USP46-209ENST00000514536 C11orf44Q8N8P7 122 aa11.06□□□□□ -0.64
USP46-209ENST00000514536 SLIRPQ9GZT3 109 aaKnown RBP11.06□□□□□ -0.64
USP46-209ENST00000514536 C6orf62Q9GZU0 229 aaPredicted RBP11.06□□□□□ -0.64
USP46-209ENST00000514536 RBM38Q9H0Z9 239 aaKnown RBP11.06□□□□□ -0.64
USP46-209ENST00000514536 SCPEP1Q9HB40 452 aa11.06□□□□□ -0.64
USP46-209ENST00000514536 LIN7CQ9NUP9 197 aaKnown RBP11.06□□□□□ -0.64
USP46-209ENST00000514536 RSL24D1Q9UHA3 163 aaKnown RBP11.06□□□□□ -0.64
USP46-209ENST00000514536 LINC01548A6NM66 108 aa11.05□□□□□ -0.64
USP46-209ENST00000514536 SULT1C2O00338 296 aa11.05□□□□□ -0.64
USP46-209ENST00000514536 NBR2O15453 112 aa11.05□□□□□ -0.64
USP46-209ENST00000514536 HLA-DMAP28067 261 aa11.05□□□□□ -0.64
USP46-209ENST00000514536 RFX2P48378 723 aa11.05□□□□□ -0.64
USP46-209ENST00000514536 RNASE12Q5GAN4 147 aaKnown RBP11.05□□□□□ -0.64
USP46-209ENST00000514536 CENPVQ7Z7K6 275 aaPredicted RBP11.05□□□□□ -0.64
USP46-209ENST00000514536 FAM71E2Q8N5Q1 922 aa11.05□□□□□ -0.64
USP46-209ENST00000514536 ABHD1Q96SE0 405 aa11.05□□□□□ -0.64
USP46-209ENST00000514536 SLC35D1Q9NTN3 355 aa11.05□□□□□ -0.64
USP46-209ENST00000514536 EHFQ9NZC4 300 aa11.05□□□□□ -0.64
USP46-209ENST00000514536 ADAM30Q9UKF2 790 aa11.05□□□□□ -0.64
USP46-209ENST00000514536 IGHG2P01859 326 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 APOA2P02652 100 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 SLC35E3Q7Z769 313 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 ZNF645Q8N7E2 425 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 NPBQ8NG41 125 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 OR5H2Q8NGV7 314 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 MCFD2Q8NI22 146 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 GIMAP1Q8WWP7 306 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 DIRAS2Q96HU8 199 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 DCUN1D5Q9BTE7 237 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 LINC00527Q9UJ94 153 aa11.04□□□□□ -0.64
USP46-209ENST00000514536 RBBP9O75884 186 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms