RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 GALMQ96C23 342 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 LGALS12Q96DT0 336 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 TMEM68Q96MH6 324 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 MYCBPQ99417 103 aaPredicted RBP8.19□□□□□ -1.1
DDX41-216ENST00000513562 TSNAXQ99598 290 aaKnown RBP8.19□□□□□ -1.1
DDX41-216ENST00000513562 PARP12Q9H0J9 701 aaKnown RBP8.19□□□□□ -1.1
DDX41-216ENST00000513562 TP53TG1Q9Y2A0 90 aa8.19□□□□□ -1.1
DDX41-216ENST00000513562 H3BNX3 289 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 GPX5O75715 221 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 IGKV1-16P04430 117 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 MED14OSP0DP75 135 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 FUT3P21217 361 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 BMI1P35226 326 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 KIR2DS2P43631 304 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 HMGN3Q15651 99 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 SIGIRRQ6IA17 410 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 WDR89Q96FK6 387 aaPredicted RBP8.18□□□□□ -1.1
DDX41-216ENST00000513562 OR14A2Q96R54 314 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 ZNF184Q99676 751 aaPredicted RBP8.18□□□□□ -1.1
DDX41-216ENST00000513562 IMPAD1Q9NX62 359 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 TECRQ9NZ01 308 aaKnown RBP8.18□□□□□ -1.1
DDX41-216ENST00000513562 STEAP1Q9UHE8 339 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 LRRC42Q9Y546 428 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 DNAH6Q9C0G6 4158 aa8.18□□□□□ -1.1
DDX41-216ENST00000513562 UBE2QL1A1L167 161 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 FOLR2P14207 255 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 CPEP16870 476 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 EDN2P20800 178 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 LGALS7P47929 136 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 GBX2P52951 348 aaPredicted RBP8.17□□□□□ -1.1
DDX41-216ENST00000513562 SNRPGP62308 76 aaKnown RBP8.17□□□□□ -1.1
DDX41-216ENST00000513562 PRR20EP86478 221 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 PRR20CP86479 221 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 PRR20DP86480 221 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 PRR20BP86481 221 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 PRR20AP86496 221 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 RIPK1Q13546 671 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 MEDAGQ5VYS4 303 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 PHLDA1Q8WV24 401 aaPredicted RBP8.17□□□□□ -1.1
DDX41-216ENST00000513562 ABHD14BQ96IU4 210 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 SULT4A1Q9BR01 284 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 AGMATQ9BSE5 352 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 COA4Q9NYJ1 87 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 POMPQ9Y244 141 aa8.17□□□□□ -1.1
DDX41-216ENST00000513562 C2orf70A6NJV1 201 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 ITGB1BP1O14713 200 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 SPRY2O43597 315 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 PDCD6O75340 191 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 MGMTP16455 207 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 IGFBP3P17936 291 aaPredicted RBP8.16□□□□□ -1.1
DDX41-216ENST00000513562 GTF2A1P52655 376 aaPredicted RBP8.16□□□□□ -1.1
DDX41-216ENST00000513562 RPS16P62249 146 aaKnown RBP8.16□□□□□ -1.1
DDX41-216ENST00000513562 PJVKQ0ZLH3 352 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 GLIPR1L1Q6UWM5 242 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 Q6ZWC4 215 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 PDPNQ86YL7 162 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 TMEM217Q8N7C4 229 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 DRAXINQ8NBI3 349 aaPredicted RBP8.16□□□□□ -1.1
DDX41-216ENST00000513562 IL1F10Q8WWZ1 152 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 MUL1Q969V5 352 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 ORAI1Q96D31 301 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 Q96M66 194 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 SELENOIQ9C0D9 397 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 BANF2Q9H503 90 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 ERVK13-1Q9NX77 482 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 ABRACLQ9P1F3 81 aa8.16□□□□□ -1.1
DDX41-216ENST00000513562 ZNF230Q9UIE0 474 aaPredicted RBP8.16□□□□□ -1.1
DDX41-216ENST00000513562 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.15□□□□□ -1.1
DDX41-216ENST00000513562 A0A1B0GVY2 172 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 SNTNA6NMZ2 147 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 PROP1O75360 226 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 BAG2O95816 211 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 IGLV2-23P01705 113 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 CRYGBP07316 175 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 FASP25445 335 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 CAPGP40121 348 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 GYS2P54840 703 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 LINC00205P59089 165 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 EXOSC2Q13868 293 aaKnown RBP8.15□□□□□ -1.1
DDX41-216ENST00000513562 XAF1Q6GPH4 301 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 TMEM61Q8N0U2 210 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 ZNF383Q8NA42 475 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 ADAD2Q8NCV1 583 aaKnown RBP8.15□□□□□ -1.1
DDX41-216ENST00000513562 OR52B4Q8NGK2 314 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 AKIP1Q9NQ31 210 aa8.15□□□□□ -1.1
DDX41-216ENST00000513562 DNAH17Q9UFH2 4485 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 FAM223BA6NKX1 122 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 LGALS9O00182 355 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 CRTAPO75718 401 aaPredicted RBP8.14□□□□□ -1.11
DDX41-216ENST00000513562 RHOGP84095 191 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 DEFB135Q30KP9 77 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 CCDC58Q4VC31 144 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 AWAT2Q6E213 333 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 RPL22L1Q6P5R6 122 aaKnown RBP8.14□□□□□ -1.11
DDX41-216ENST00000513562 AMIGO2Q86SJ2 522 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 FAM223AQ8IWN6 122 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 SVOPQ8N4V2 548 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 KCNG3Q8TAE7 436 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 DMRT1Q9Y5R6 373 aa8.14□□□□□ -1.11
DDX41-216ENST00000513562 TRAV8-7A0A075B6U6 113 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms