RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 SSTR5P35346 364 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 NDUFA6P56556 154 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 NECAP1Q8NC96 275 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 OR13D1Q8NGV5 346 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 LINC01560Q8TB33 94 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 GALNT14Q96FL9 552 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 PARD6AQ9NPB6 346 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 JPT1Q9UK76 154 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 SLC45A2Q9UMX9 530 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 GTF3C1Q12789 2109 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 CACNA1AO00555 2505 aa11.14□□□□□ -0.63
PCDHA4-202ENST00000512229 FOXF2Q12947 444 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 SELENOHQ8IZQ5 122 aaKnown RBP11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 MUC15Q8N387 334 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 DRAM1Q8N682 238 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 LINC00052Q96N35 136 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 OR51I2Q9H344 312 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 ZDHHC11Q9H8X9 412 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 ZNF835Q9Y2P0 537 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 CT45A10P0DMU9 189 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 MUC1P15941 1255 aaPredicted RBP11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 FAM166AQ6J272 317 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 ZGRF1Q86YA3 2104 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 KDF1Q8NAX2 398 aaPredicted RBP11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 OR52M1Q8NGK5 317 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 ZCCHC14Q8WYQ9 949 aaKnown RBP11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 IL22RA2Q969J5 263 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 PARP11Q9NR21 331 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 PLSCR2Q9NRY7 297 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 LRRK1Q38SD2 2015 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 OTOGLQ3ZCN5 2332 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 HNF1AP20823 631 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 ZNF90Q03938 601 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 CLEC12BQ2HXU8 276 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 ZNF596Q8TC21 504 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 TP53RKQ96S44 253 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 PATZ1Q9HBE1 687 aaKnown RBP11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 SHANK1Q9Y566 2161 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 ACACBO00763 2458 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 ZNF705FA8MVS1 300 aaPredicted RBP11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 C12orf77C9JDV5 145 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 H0YL77 283 aa11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 ZNF705DP0CH99 300 aaPredicted RBP11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 ZNF705BP0CI00 300 aaPredicted RBP11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 OTX1P32242 354 aaPredicted RBP11.13□□□□□ -0.63
PCDHA4-202ENST00000512229 C5orf63A6NC05 138 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 B9A039 149 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 IL18BPO95998 194 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 KIR2DL2P43627 348 aaPredicted RBP11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 C2orf68Q2NKX9 166 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 DHRS11Q6UWP2 260 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 STPG2Q8N412 459 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 SSMEM1Q8WWF3 244 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 C1RLQ9NZP8 487 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 RUNX1Q01196 453 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 IZUMO4Q1ZYL8 232 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 TPPP3Q9BW30 176 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 ZNF331Q9NQX6 463 aaPredicted RBP11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 PIEZO1Q92508 2521 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 PITX3O75364 302 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 PGA5P0DJD9 388 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 HKR1P10072 659 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 ZNF561Q8N587 486 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 OR10A7Q8NGE5 316 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 LURAP1Q96LR2 239 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 RTBDNQ9BSG5 229 aaPredicted RBP11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 PROK2Q9HC23 129 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 IDI2-AS1Q9NZ38 188 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 DOCK10Q96BY6 2186 aa11.12□□□□□ -0.63
PCDHA4-202ENST00000512229 LDLRAD4O15165 306 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 APOBEC3AP31941 199 aaPredicted RBP11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 SPCS3P61009 180 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 TMEM241Q24JQ0 296 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 OR2T6Q8NHC8 308 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 C2CD4CQ8TF44 421 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 RAXQ9Y2V3 346 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 IGKV1-12A0A0C4DH73 117 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 IGKV1D-12P01611 117 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 MC5RP33032 325 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 SULT1A2P50226 295 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 SERF2P84101 59 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 FAM209AQ5JX71 171 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 DOLPP1Q86YN1 238 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 CLRN3Q8NCR9 226 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 PLSCR4Q9NRQ2 329 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 A0A0A6YYD4 124 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 ZNF729A6NN14 1252 aaPredicted RBP11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 ATXN7O15265 892 aaPredicted RBP11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 WNT5AP41221 380 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 CNN1P51911 297 aaKnown RBP11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 ERVFRD-1P60508 538 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 BSPH1Q075Z2 132 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 FAM201AQ5SY85 155 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 GLRX5Q86SX6 157 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 LEAP2Q969E1 77 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 DOK5Q9P104 306 aa11.11□□□□□ -0.63
PCDHA4-202ENST00000512229 KIAA1671Q9BY89 1806 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms