RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CFHR2P36980 270 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 GATA4P43694 442 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 PAX9P55771 341 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 DEFA5Q01523 94 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 MORN2Q502X0 79 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 NCR3LG1Q68D85 454 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 STUMQ69YW2 141 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 HSD17B13Q7Z5P4 300 aaPredicted RBP12.34□□□□□ -0.43
PHF3-209ENST00000509330 DMRTC2Q8IXT2 367 aaPredicted RBP12.34□□□□□ -0.43
PHF3-209ENST00000509330 RNF115Q9Y4L5 304 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 ASH1LQ9NR48 2969 aaKnown RBP12.34□□□□□ -0.43
PHF3-209ENST00000509330 BORCS7-ASMTA0A0B4J1R7 106 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 FCGR3BO75015 233 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 PROP1O75360 226 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 ZP3P21754 424 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 CA7P43166 264 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 MST1LQ2TV78 715 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 GPR157Q5UAW9 335 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 ZNF295-AS1Q8N0V1 137 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 IL22RA2Q969J5 263 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 MARC2Q969Z3 335 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 C11orf1Q9H5F2 150 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 HIVEP3Q5T1R4 2406 aa12.34□□□□□ -0.43
PHF3-209ENST00000509330 KIAA1324LA8MWY0 1029 aaPredicted RBP12.33□□□□□ -0.43
PHF3-209ENST00000509330 CRYZL1O95825 349 aa12.33□□□□□ -0.43
PHF3-209ENST00000509330 SWI5Q1ZZU3 235 aa12.33□□□□□ -0.43
PHF3-209ENST00000509330 SPANXN5Q5MJ07 72 aa12.33□□□□□ -0.43
PHF3-209ENST00000509330 C1orf229Q6ZS94 237 aaPredicted RBP12.33□□□□□ -0.43
PHF3-209ENST00000509330 MED9Q9NWA0 146 aa12.33□□□□□ -0.43
PHF3-209ENST00000509330 DUXBA0A1W2PPF3 345 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 GZMHP20718 246 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 EIF5AP63241 154 aaKnown RBP12.33□□□□□ -0.44
PHF3-209ENST00000509330 CATR1Q13166 79 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 PRAMEF5Q5TYX0 476 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 UBAC2Q8NBM4 344 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 ZCCHC14Q8WYQ9 949 aaKnown RBP12.33□□□□□ -0.44
PHF3-209ENST00000509330 ABHD14AQ9BUJ0 271 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 TREM1Q9NP99 234 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 A0A1B0GU03 582 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 PITX3O75364 302 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 F12P00748 615 aaPredicted RBP12.33□□□□□ -0.44
PHF3-209ENST00000509330 TNFRSF1AP19438 455 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 OR2B8PP59922 312 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 PRB3Q04118 309 aaPredicted RBP12.33□□□□□ -0.44
PHF3-209ENST00000509330 C17orf58Q2M2W7 97 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 ATRAIDQ6UW56 229 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 TCF23Q7RTU1 214 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 H1FXQ92522 213 aaKnown RBP12.33□□□□□ -0.44
PHF3-209ENST00000509330 ZDHHC16Q969W1 377 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 C14orf79Q96F83 325 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 ZNF665Q9H7R5 613 aa12.33□□□□□ -0.44
PHF3-209ENST00000509330 ARFGEF3Q5TH69 2177 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 CLEC18AA5D8T8 446 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 RNF212BA8MTL3 300 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 SYNGR2O43760 224 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 LOXL3P58215 753 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 EIF5AL1Q6IS14 154 aaKnown RBP12.32□□□□□ -0.44
PHF3-209ENST00000509330 LYPD2Q6UXB3 125 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 ZNF561Q8N587 486 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 CLEC18CQ8NCF0 446 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 CLN8Q9UBY8 286 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 HRNRQ86YZ3 2850 aaPredicted RBP12.32□□□□□ -0.44
PHF3-209ENST00000509330 GAPDHP04406 335 aaKnown RBP12.32□□□□□ -0.44
PHF3-209ENST00000509330 ADH4P08319 380 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 PLA2G5P39877 138 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 OR8G2PQ6IF36 304 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 SLC25A24Q6NUK1 477 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 CA5BP1Q8WTZ4 195 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 RNASE6Q93091 150 aaKnown RBP12.32□□□□□ -0.44
PHF3-209ENST00000509330 PSENENQ9NZ42 101 aa12.32□□□□□ -0.44
PHF3-209ENST00000509330 TRGV10A0A0A0MS01 117 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 EIF3GO75821 320 aaKnown RBP eCLIP12.31□□□□□ -0.44
PHF3-209ENST00000509330 CCL3L1P16619 93 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 ADORA2A-AS1P86434 159 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 BTN1A1Q13410 526 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 NCMAPQ5T1S8 102 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 LYG1Q8N1E2 194 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 NGBQ9NPG2 151 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 CISD1Q9NZ45 108 aaKnown RBP12.31□□□□□ -0.44
PHF3-209ENST00000509330 OR6C3Q9NZP0 311 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 ACACBO00763 2458 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 LRRC30A6NM36 301 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 SIAH2O43255 324 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 LY6HO94772 140 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 CD3EP07766 207 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 ATP6V0CP27449 155 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 CAMLGP49069 296 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 SULT1A2P50226 295 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 HTD2P86397 168 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 ZNF273Q14593 569 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 ZNF788Q6ZQV5 615 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 FAM213BQ8TBF2 198 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 SLC25A31Q9H0C2 315 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 C19orf12Q9NSK7 152 aa12.31□□□□□ -0.44
PHF3-209ENST00000509330 SHOXO15266 292 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 ARL16Q0P5N6 197 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 FAM222BQ8WU58 562 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 EDARADDQ8WWZ3 215 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 FCN3O75636 299 aa12.3□□□□□ -0.44
PHF3-209ENST00000509330 RPL23AP62750 156 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms