RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 C18orf12Q96KH6 178 aa4.53□□□□□ -1.68
APC-208ENST00000508624 HDHD3Q9BSH5 251 aaPredicted RBP4.53□□□□□ -1.68
APC-208ENST00000508624 RBKSQ9H477 322 aa4.53□□□□□ -1.68
APC-208ENST00000508624 K7N7A8 449 aa4.53□□□□□ -1.68
APC-208ENST00000508624 IGHV4-34P06331 123 aa4.53□□□□□ -1.68
APC-208ENST00000508624 FGF5P12034 268 aa4.53□□□□□ -1.68
APC-208ENST00000508624 PSG4Q00888 419 aa4.53□□□□□ -1.68
APC-208ENST00000508624 PLAC9Q5JTB6 97 aa4.53□□□□□ -1.68
APC-208ENST00000508624 FAM166AQ6J272 317 aa4.53□□□□□ -1.68
APC-208ENST00000508624 MRGPRDQ8TDS7 321 aa4.53□□□□□ -1.68
APC-208ENST00000508624 IL17BQ9UHF5 180 aa4.53□□□□□ -1.68
APC-208ENST00000508624 MRPS18CQ9Y3D5 142 aaKnown RBP4.53□□□□□ -1.68
APC-208ENST00000508624 H3BMH7 237 aa4.53□□□□□ -1.68
APC-208ENST00000508624 ZNF207O43670 478 aaKnown RBP4.53□□□□□ -1.68
APC-208ENST00000508624 CIDEAO60543 219 aa4.53□□□□□ -1.68
APC-208ENST00000508624 ADRA2AP08913 450 aa4.53□□□□□ -1.68
APC-208ENST00000508624 RPL13AP40429 203 aaKnown RBP4.53□□□□□ -1.68
APC-208ENST00000508624 MEOX1P50221 254 aa4.53□□□□□ -1.68
APC-208ENST00000508624 RUNX1Q01196 453 aa4.53□□□□□ -1.68
APC-208ENST00000508624 SPATA45Q537H7 98 aa4.53□□□□□ -1.68
APC-208ENST00000508624 CXorf66Q5JRM2 361 aaPredicted RBP4.53□□□□□ -1.68
APC-208ENST00000508624 SLC35E4Q6ICL7 350 aa4.53□□□□□ -1.68
APC-208ENST00000508624 GUSBP11Q6P575 273 aa4.53□□□□□ -1.68
APC-208ENST00000508624 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.53□□□□□ -1.68
APC-208ENST00000508624 SLC25A40Q8TBP6 338 aa4.53□□□□□ -1.68
APC-208ENST00000508624 MBD3L1Q8WWY6 194 aa4.53□□□□□ -1.68
APC-208ENST00000508624 WDYHV1Q96HA8 205 aa4.53□□□□□ -1.68
APC-208ENST00000508624 RCC1LQ96I51 464 aaKnown RBP4.53□□□□□ -1.68
APC-208ENST00000508624 DEFB127Q9H1M4 99 aa4.53□□□□□ -1.68
APC-208ENST00000508624 COA4Q9NYJ1 87 aa4.53□□□□□ -1.68
APC-208ENST00000508624 CLN8Q9UBY8 286 aa4.53□□□□□ -1.68
APC-208ENST00000508624 IGKV3D-11A0A0A0MRZ8 115 aa4.52□□□□□ -1.69
APC-208ENST00000508624 FAM90A9PA6NNJ1 464 aa4.52□□□□□ -1.69
APC-208ENST00000508624 COLCA2A8K830 154 aa4.52□□□□□ -1.69
APC-208ENST00000508624 C1QL1O75973 258 aa4.52□□□□□ -1.69
APC-208ENST00000508624 KLK2P20151 261 aa4.52□□□□□ -1.69
APC-208ENST00000508624 COL8A1P27658 744 aa4.52□□□□□ -1.69
APC-208ENST00000508624 PPOXP50336 477 aa4.52□□□□□ -1.69
APC-208ENST00000508624 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.52□□□□□ -1.69
APC-208ENST00000508624 BARX1Q9HBU1 254 aaPredicted RBP4.52□□□□□ -1.69
APC-208ENST00000508624 JPT1Q9UK76 154 aa4.52□□□□□ -1.69
APC-208ENST00000508624 A0A1B0GW15 77 aa4.52□□□□□ -1.69
APC-208ENST00000508624 MED19A0JLT2 244 aaPredicted RBP4.52□□□□□ -1.69
APC-208ENST00000508624 MSGN1A6NI15 193 aa4.52□□□□□ -1.69
APC-208ENST00000508624 CELA2BP08218 269 aaPredicted RBP4.52□□□□□ -1.69
APC-208ENST00000508624 HERVK_113P61574 105 aa4.52□□□□□ -1.69
APC-208ENST00000508624 TMEM238LA0A1B0GVL6 79 aa4.52□□□□□ -1.69
APC-208ENST00000508624 A6NJY4 79 aa4.52□□□□□ -1.69
APC-208ENST00000508624 NPIPB7O75200 414 aa4.52□□□□□ -1.69
APC-208ENST00000508624 NDUFB4O95168 129 aa4.52□□□□□ -1.69
APC-208ENST00000508624 IGLV3-19P01714 112 aa4.52□□□□□ -1.69
APC-208ENST00000508624 SMIM17P0DL12 118 aa4.52□□□□□ -1.69
APC-208ENST00000508624 MC5RP33032 325 aa4.52□□□□□ -1.69
APC-208ENST00000508624 IBA57Q5T440 356 aaKnown RBP4.52□□□□□ -1.69
APC-208ENST00000508624 FGFRL1Q8N441 504 aa4.52□□□□□ -1.69
APC-208ENST00000508624 SMIM12Q96EX1 92 aa4.52□□□□□ -1.69
APC-208ENST00000508624 SLC25A33Q9BSK2 321 aa4.52□□□□□ -1.69
APC-208ENST00000508624 TMEM70Q9BUB7 260 aa4.52□□□□□ -1.69
APC-208ENST00000508624 RPRMQ9NS64 109 aa4.52□□□□□ -1.69
APC-208ENST00000508624 TANC1Q9C0D5 1861 aa4.52□□□□□ -1.69
APC-208ENST00000508624 M0R1B8 84 aa4.52□□□□□ -1.69
APC-208ENST00000508624 SIAH2O43255 324 aa4.52□□□□□ -1.69
APC-208ENST00000508624 EDN3P14138 238 aa4.52□□□□□ -1.69
APC-208ENST00000508624 ZCCHC14Q8WYQ9 949 aaKnown RBP4.52□□□□□ -1.69
APC-208ENST00000508624 IL36BQ9NZH7 164 aa4.52□□□□□ -1.69
APC-208ENST00000508624 A0A0J9YW62 118 aa4.52□□□□□ -1.69
APC-208ENST00000508624 FCER1GP30273 86 aa4.52□□□□□ -1.69
APC-208ENST00000508624 TMEM108Q6UXF1 575 aa4.52□□□□□ -1.69
APC-208ENST00000508624 GATAD1Q8WUU5 269 aa4.52□□□□□ -1.69
APC-208ENST00000508624 ZNF385AQ96PM9 386 aaKnown RBP4.52□□□□□ -1.69
APC-208ENST00000508624 TP53RKQ96S44 253 aa4.52□□□□□ -1.69
APC-208ENST00000508624 PAXXQ9BUH6 204 aa4.52□□□□□ -1.69
APC-208ENST00000508624 DLL3Q9NYJ7 618 aa4.52□□□□□ -1.69
APC-208ENST00000508624 TCFL5Q9UL49 500 aa4.52□□□□□ -1.69
APC-208ENST00000508624 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.52□□□□□ -1.69
APC-208ENST00000508624 IFITM10A6NMD0 228 aa4.52□□□□□ -1.69
APC-208ENST00000508624 CEACAM18A8MTB9 384 aa4.52□□□□□ -1.69
APC-208ENST00000508624 J3QR06 171 aa4.52□□□□□ -1.69
APC-208ENST00000508624 LINC00271P0C7V0 271 aa4.52□□□□□ -1.69
APC-208ENST00000508624 G6PCP35575 357 aa4.52□□□□□ -1.69
APC-208ENST00000508624 ZNF146Q15072 292 aa4.52□□□□□ -1.69
APC-208ENST00000508624 SLC25A34Q6PIV7 304 aa4.52□□□□□ -1.69
APC-208ENST00000508624 C11orf42Q8N5U0 333 aa4.52□□□□□ -1.69
APC-208ENST00000508624 SH3BGRL3Q9H299 93 aa4.52□□□□□ -1.69
APC-208ENST00000508624 NEURL1O76050 574 aa4.51□□□□□ -1.69
APC-208ENST00000508624 CCL3P10147 92 aa4.51□□□□□ -1.69
APC-208ENST00000508624 MFAP2P55001 183 aa4.51□□□□□ -1.69
APC-208ENST00000508624 TNFAIP6P98066 277 aaPredicted RBP4.51□□□□□ -1.69
APC-208ENST00000508624 HES1Q14469 280 aa4.51□□□□□ -1.69
APC-208ENST00000508624 PDCD1Q15116 288 aa4.51□□□□□ -1.69
APC-208ENST00000508624 SPATA46Q5T0L3 261 aa4.51□□□□□ -1.69
APC-208ENST00000508624 TDHQ8IZJ6 230 aa4.51□□□□□ -1.69
APC-208ENST00000508624 FGF11Q92914 225 aa4.51□□□□□ -1.69
APC-208ENST00000508624 NRTNQ99748 197 aa4.51□□□□□ -1.69
APC-208ENST00000508624 RARRES2Q99969 163 aa4.51□□□□□ -1.69
APC-208ENST00000508624 A0A1W2PP11 408 aa4.51□□□□□ -1.69
APC-208ENST00000508624 FBLL1A6NHQ2 334 aaKnown RBP4.51□□□□□ -1.69
APC-208ENST00000508624 NCBP2LA6PVI3 153 aaKnown RBP4.51□□□□□ -1.69
APC-208ENST00000508624 LINC00587B1AMM8 73 aa4.51□□□□□ -1.69
APC-208ENST00000508624 C1QTNF9BB2RNN3 333 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms