RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 EGR1P18146 543 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 CHRNA7P36544 502 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 TSPAN7P41732 249 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 ZNF816Q0VGE8 651 aaPredicted RBP11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 WDR86Q86TI4 376 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 OR2T10Q8NGZ9 312 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 TP53TG5Q9Y2B4 290 aa11.31□□□□□ -0.6
SNCAIP-209ENST00000508017 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 OR5B21A6NL26 309 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 GCGP01275 180 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 HOXA6P31267 233 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 RPL30P62888 115 aaKnown RBP11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 ZNF124Q15973 351 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 SPINK9Q5DT21 86 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 VASH2Q86V25 355 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 ZDHHC16Q969W1 377 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 C5orf30Q96GV9 206 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 HES7Q9BYE0 225 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 OR6C3Q9NZP0 311 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 PMS2P5A8MQ11 134 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 GGCTO75223 188 aaKnown RBP11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 CYB561P49447 251 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 LHX2P50458 406 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 ZNF808Q8N4W9 903 aaPredicted RBP11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 OR1L1Q8NH94 360 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 LURAP1Q96LR2 239 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 UBE2ZQ9H832 354 aaPredicted RBP11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 HSPB7Q9UBY9 170 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 WASF3Q9UPY6 502 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 MPC1Q9Y5U8 109 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 CACNA1DQ01668 2161 aa11.3□□□□□ -0.6
SNCAIP-209ENST00000508017 J3QT63 122 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 ZG16O60844 167 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 CRYAAP02489 173 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 CEBPDP49716 269 aaPredicted RBP11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 SLC10A1Q14973 349 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 MRPL41Q8IXM3 137 aaKnown RBP11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 ATG101Q9BSB4 218 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 TMEM147Q9BVK8 224 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 ODAMA1E959 279 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 FAM90A26D6RGX4 464 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 MT-CO3P00414 261 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 CFIP05156 583 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 CLDN18P56856 261 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 C3AR1Q16581 482 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 LBHQ53QV2 105 aaPredicted RBP11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 FAM78BQ5VT40 261 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 HLA-CQ95604 372 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 ANAPC16Q96DE5 110 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 NEIL1Q96FI4 390 aaPredicted RBP11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 PKIBQ9C010 78 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 MANBALQ9NQG1 85 aa11.29□□□□□ -0.6
SNCAIP-209ENST00000508017 TCAPO15273 167 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 S1PR2O95136 353 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 SELEP16581 610 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 IL3RAP26951 378 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 MPLP40238 635 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 SPCS3P61009 180 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 HOXA4Q00056 320 aaPredicted RBP11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 PAX5Q02548 391 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 PLP2Q04941 152 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 TEX38Q6PEX7 206 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 MOB1BQ7L9L4 216 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 NUFIP2Q7Z417 695 aaKnown RBP11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 BEND2Q8NDZ0 799 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 TMEM18Q96B42 140 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 MRPS18CQ9Y3D5 142 aaKnown RBP11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 PRRC2CQ9Y520 2896 aaKnown RBP11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 LRRC30A6NM36 301 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 FAM166BA8MTA8 275 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 NTN3O00634 580 aaPredicted RBP11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 P0C879 139 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 ARR3P36575 388 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 APH1AQ96BI3 265 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 DERL1Q9BUN8 251 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 OR2D2Q9H210 308 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 KMT2EQ8IZD2 1858 aa11.28□□□□□ -0.6
SNCAIP-209ENST00000508017 PGPEP1LA6NFU8 196 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 C11orf94C9JXX5 98 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 TYMSP04818 313 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 COX5AP20674 150 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 SRP14P37108 136 aaKnown RBP11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 BRWD1-AS2P59051 145 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 LINC00205P59089 165 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 UBE2G2P60604 165 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 ACOT6Q3I5F7 207 aaPredicted RBP11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 GCSAMLQ5JQS6 135 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 BTNL3Q6UXE8 466 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 GBGT1Q8N5D6 347 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 CISD2Q8N5K1 135 aaKnown RBP11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 SCCPDHQ8NBX0 429 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 NEU1Q99519 415 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 MBNL3Q9NUK0 354 aaKnown RBP11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 PILRBQ9UKJ0 227 aa11.27□□□□□ -0.6
SNCAIP-209ENST00000508017 C17orf98A8MV24 154 aa11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 PATE3B3GLJ2 98 aa11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 NUPR1O60356 82 aa11.27□□□□□ -0.61
SNCAIP-209ENST00000508017 ATP5G3P48201 142 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms