RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 P0C879 139 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 IGHV3-43DP0DP04 118 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 SSTR2P30874 369 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 DUTP33316 252 aaKnown RBP10.94□□□□□ -0.66
LMNA-220ENST00000504687 NUP62P37198 522 aaPredicted RBP10.94□□□□□ -0.66
LMNA-220ENST00000504687 KIR2DS2P43631 304 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 GPR12P47775 334 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 ZNF134P52741 427 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 RPL30P62888 115 aaKnown RBP10.94□□□□□ -0.66
LMNA-220ENST00000504687 CT45A1Q5HYN5 189 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 FAM71F2Q6NXP2 309 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 ZNF680Q8NEM1 530 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 CT45A3Q8NHU0 189 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 DCUN1D4Q92564 292 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 ADTRPQ96IZ2 230 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 GSKIPQ9P0R6 139 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 MMP24Q9Y5R2 645 aa10.94□□□□□ -0.66
LMNA-220ENST00000504687 A0A1W2PPH5 198 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 C17orf98A8MV24 154 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 F5H0A9 414 aaPredicted RBP10.93□□□□□ -0.66
LMNA-220ENST00000504687 TAAR5O14804 337 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 ST8SIA5O15466 376 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 P2RY1P47900 373 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 EFNA4P52798 201 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 BRWD1-AS2P59051 145 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 ZNF273Q14593 569 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 GPR157Q5UAW9 335 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 THOC7Q6I9Y2 204 aaKnown RBP10.93□□□□□ -0.66
LMNA-220ENST00000504687 FAM53AQ6NSI3 398 aaPredicted RBP10.93□□□□□ -0.66
LMNA-220ENST00000504687 ODF3L1Q8IXM7 274 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 DDB2Q92466 427 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 TNFRSF14Q92956 283 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 PHYHIPLQ96FC7 376 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 NEIL1Q96FI4 390 aaPredicted RBP10.93□□□□□ -0.66
LMNA-220ENST00000504687 GPHA2Q96T91 129 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 ZNF251Q9BRH9 671 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 OR5AC2Q9NZP5 309 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 RNF150Q9ULK6 438 aa10.93□□□□□ -0.66
LMNA-220ENST00000504687 KANTRA0A1W2PQU2 76 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 IGKV1-5P01602 117 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 NKX2-1P43699 371 aaPredicted RBP10.92□□□□□ -0.66
LMNA-220ENST00000504687 ZNF137PP52743 207 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 UBA52P62987 128 aaKnown RBP10.92□□□□□ -0.66
LMNA-220ENST00000504687 TAGLNQ01995 201 aaKnown RBP10.92□□□□□ -0.66
LMNA-220ENST00000504687 AARDQ4LEZ3 155 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 FGFRL1Q8N441 504 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 LY6G5BQ8NDX9 201 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 OR8H1Q8NGG4 311 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 OR8B3Q8NGG8 313 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 STOML3Q8TAV4 291 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 GPR146Q96CH1 333 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 RRNAD1Q96FB5 475 aaKnown RBP10.92□□□□□ -0.66
LMNA-220ENST00000504687 OR8B2Q96RD0 313 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 ARPC5LQ9BPX5 153 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 CACFD1Q9UGQ2 172 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 ROS1P08922 2347 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 PKDREJQ9NTG1 2253 aa10.92□□□□□ -0.66
LMNA-220ENST00000504687 LINC00473A8K010 186 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 KIAA1324LA8MWY0 1029 aaPredicted RBP10.91□□□□□ -0.66
LMNA-220ENST00000504687 HPRT1P00492 218 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 HKR1P10072 659 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 OMGP23515 440 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 LPAR6P43657 344 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 THBS3P49746 956 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 S100A10P60903 97 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 SPAG16Q8N0X2 631 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 C11orf42Q8N5U0 333 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 DMBX1Q8NFW5 382 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 TCTEX1D2Q8WW35 142 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 PATZ1Q9HBE1 687 aaKnown RBP10.91□□□□□ -0.66
LMNA-220ENST00000504687 UBQLN2Q9UHD9 624 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 RCL1Q9Y2P8 373 aaKnown RBP10.91□□□□□ -0.66
LMNA-220ENST00000504687 PRELID3BQ9Y3B1 194 aa10.91□□□□□ -0.66
LMNA-220ENST00000504687 A0A0G2JRQ6 117 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 LYNX1G3V0Z9 82 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 TOR1AO14656 332 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 SLC31A2O15432 143 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 TSC22D2O75157 780 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 MMP23AO75900 390 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 LYNX1P0DP58 116 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 PVALBP20472 110 aaPredicted RBP10.9□□□□□ -0.66
LMNA-220ENST00000504687 RPL12P30050 165 aaKnown RBP10.9□□□□□ -0.66
LMNA-220ENST00000504687 SRSF1Q07955 248 aaKnown RBP eCLIP10.9□□□□□ -0.66
LMNA-220ENST00000504687 EXOSC2Q13868 293 aaKnown RBP10.9□□□□□ -0.66
LMNA-220ENST00000504687 POU2AF1Q16633 256 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 PRAMEF5Q5TYX0 476 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 WDR25Q64LD2 544 aaPredicted RBP10.9□□□□□ -0.66
LMNA-220ENST00000504687 DHRS7BQ6IAN0 325 aaPredicted RBP10.9□□□□□ -0.66
LMNA-220ENST00000504687 ZNF833PQ6ZTB9 187 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 H1FXQ92522 213 aaKnown RBP10.9□□□□□ -0.66
LMNA-220ENST00000504687 UBTD1Q9HAC8 227 aa10.9□□□□□ -0.66
LMNA-220ENST00000504687 ADGRG4Q8IZF6 3080 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 SAA2-SAA4A0A096LPE2 208 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 MSGN1A6NI15 193 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 M0R1X1 148 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 GPR137BO60478 399 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 RAMP3O60896 148 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 LY86O95711 162 aa10.89□□□□□ -0.67
LMNA-220ENST00000504687 GAPDHP04406 335 aaKnown RBP10.89□□□□□ -0.67
LMNA-220ENST00000504687 SAA2P0DJI9 122 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms