RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 LCN12Q6JVE5 192 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 OR1L1Q8NH94 360 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 PSMF1Q92530 271 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 NABP1Q96AH0 204 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 SPSB1Q96BD6 273 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 PRRG4Q9BZD6 226 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 WDR61Q9GZS3 305 aaKnown RBP6.47□□□□□ -1.37
NEDD9-208ENST00000504387 DEPPQ9NTK1 212 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 A0A1W2PR77 199 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 AQP7P3A6NL99 342 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 DEFB108AA8MXU0 73 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 FCN1O00602 326 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 RAMP3O60896 148 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 IGKV1-5P01602 117 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 CCL4P13236 92 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 CRISP2P16562 243 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 KITLGP21583 273 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 CA6P23280 308 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 UCP1P25874 307 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 CCKARP32238 428 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 SRPXP78539 464 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 ACOT6Q3I5F7 207 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-208ENST00000504387 VHLLQ6RSH7 139 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF573Q86YE8 665 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 ZNF441Q8N8Z8 693 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 DNASE2BQ8WZ79 361 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 SPACA9Q96E40 222 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-208ENST00000504387 ACY3Q96HD9 319 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 TMEM106BQ9NUM4 274 aa6.47□□□□□ -1.37
NEDD9-208ENST00000504387 A0A0J9YW62 118 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 C20orf202A1L168 122 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 C5orf49A4QMS7 147 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 TMEM210A6NLX4 147 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 M0QZ24 198 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 ETV2O00321 342 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-208ENST00000504387 ZG16O60844 167 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 NGFP01138 241 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 IGHEP01854 428 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 OR5G3P0C626 314 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 CEBPDP49716 269 aaPredicted RBP6.46□□□□□ -1.37
NEDD9-208ENST00000504387 FXYD3Q14802 87 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 LHFPL2Q6ZUX7 228 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 R3HDM4Q96D70 268 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 SRXN1Q9BYN0 137 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 TMEM242Q9NWH2 141 aa6.46□□□□□ -1.37
NEDD9-208ENST00000504387 MRPS18CQ9Y3D5 142 aaKnown RBP6.46□□□□□ -1.37
NEDD9-208ENST00000504387 H0Y8G0 127 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 TOX3O15405 576 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-208ENST00000504387 PRB4P10163 310 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-208ENST00000504387 SLC25A6P12236 298 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 OTX1P32242 354 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-208ENST00000504387 AMTP48728 403 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 FOXG1P55316 489 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-208ENST00000504387 LRRC75BQ2VPJ9 315 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 HLA-DRB5Q30154 266 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 WIPI1Q5MNZ9 446 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-208ENST00000504387 HES3Q5TGS1 186 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 TPRX1Q8N7U7 411 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 CPEB3Q8NE35 698 aaKnown RBP6.46□□□□□ -1.38
NEDD9-208ENST00000504387 CLDN23Q96B33 292 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 NEIL1Q96FI4 390 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-208ENST00000504387 MIEN1Q9BRT3 115 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 MTCH1Q9NZJ7 389 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 C19orf25Q9UFG5 118 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-208ENST00000504387 TRAPPC2LQ9UL33 140 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 BOD1L1Q8NFC6 3051 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 POLEQ07864 2286 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 IGHV3-43A0A0B4J1X8 118 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 MDFIC2A0A1B0GVS7 189 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 DUXBA0A1W2PPF3 345 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 SNURFLB1AK76 121 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 DIRC3C9JPN6 131 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 TRAPPC2LH3BP13 241 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 CCL25O15444 150 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 RHBDL1O75783 438 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 CLDN14O95500 239 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 IGHV3-43DP0DP04 118 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 S100GP29377 79 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 CEACAM6P40199 344 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 PTGDSP41222 190 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 GNB1P62873 340 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 SPATA45Q537H7 98 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 AAED1Q7RTV5 226 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 CXorf67Q86X51 503 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-208ENST00000504387 OR5AU1Q8NGC0 362 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 RFESDQ8TAC1 157 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 ABHD3Q8WU67 409 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 SSMEM1Q8WWF3 244 aa6.46□□□□□ -1.38
NEDD9-208ENST00000504387 ZNF552Q9H707 407 aaPredicted RBP6.46□□□□□ -1.38
NEDD9-208ENST00000504387 MED12LQ86YW9 2145 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 A0A1W2PPV4 95 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 PATE3B3GLJ2 98 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 F6UZH7 168 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 ACTL6BO94805 426 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 HOXA6P31267 233 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 FUT6P51993 359 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 PRDX4Q13162 271 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 DAZAP2Q15038 168 aaPredicted RBP6.45□□□□□ -1.38
NEDD9-208ENST00000504387 MSMO1Q15800 293 aa6.45□□□□□ -1.38
NEDD9-208ENST00000504387 TMEM183BQ1AE95 376 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms