RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 C2orf70A6NJV1 201 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 APOC4P55056 127 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 FLOT2Q14254 428 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 DEFB135Q30KP9 77 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 ANKRD55Q3KP44 614 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 LHFPL3Q86UP9 236 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 MRPL30Q8TCC3 161 aaKnown RBP11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 GPR148Q8TDV2 347 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 THRSPQ92748 146 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 CIB1Q99828 191 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 ABRACLQ9P1F3 81 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 ABCA13Q86UQ4 5058 aa11.8□□□□□ -0.52
PDLIM7-210ENST00000503827 TCRBV3S1A0A5B6 114 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 FAM90A7PA6NKC0 464 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 FAM90A23PA8MXZ1 464 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 E9PI62 339 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 H3BNX3 289 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 FUT3P21217 361 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 CALB2P22676 271 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 SSBP2P81877 361 aaPredicted RBP11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 RIPK1Q13546 671 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 ZDHHC13Q8IUH4 622 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 TRUB1Q8WWH5 349 aaKnown RBP11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 IL1F10Q8WWZ1 152 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 ABHD14BQ96IU4 210 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 ZNF184Q99676 751 aaPredicted RBP11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 SULT4A1Q9BR01 284 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 IMPAD1Q9NX62 359 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 EXOGQ9Y2C4 368 aaKnown RBP11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 VPS13DQ5THJ4 4388 aa11.79□□□□□ -0.52
PDLIM7-210ENST00000503827 UBE2CO00762 179 aa11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 IGKV1-16P04430 117 aa11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 EDN2P20800 178 aa11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 FASP25445 335 aa11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 EXOSC2Q13868 293 aaKnown RBP11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 HMGN3Q15651 99 aa11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 ZNF57Q68EA5 555 aaPredicted RBP11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 PDPNQ86YL7 162 aa11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 TMEM61Q8N0U2 210 aa11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 PHB2Q99623 299 aa11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 GABARAPL1Q9H0R8 117 aa11.78□□□□□ -0.52
PDLIM7-210ENST00000503827 A0A1B0GVY2 172 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 RBMXL2O75526 392 aaKnown RBP11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 TUSC2O75896 110 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 IFNA4P05014 189 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 TCTAP57738 103 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 ZNF45Q02386 682 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 ATP5G2Q06055 141 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 PJVKQ0ZLH3 352 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 GLIPR1L1Q6UWM5 242 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 DRAXINQ8NBI3 349 aaPredicted RBP11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 RNF183Q96D59 192 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 OR14A2Q96R54 314 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 GABARAPL3Q9BY60 117 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 SELENOIQ9C0D9 397 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 BANF2Q9H503 90 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 ZNF230Q9UIE0 474 aaPredicted RBP11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 SELENOKQ9Y6D0 94 aa11.77□□□□□ -0.53
PDLIM7-210ENST00000503827 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 FAM223BA6NKX1 122 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 SNTNA6NMZ2 147 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 BAG2O95816 211 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 APOA2P02652 100 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 OR9G9P0C7N8 305 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 APELAP0DMC3 54 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 CBLN1P23435 193 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 CAPGP40121 348 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 RHOGP84095 191 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 TM4SF20Q53R12 229 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 MEDAGQ5VYS4 303 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 FAM223AQ8IWN6 122 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 ADAD2Q8NCV1 583 aaKnown RBP11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 KCNG3Q8TAE7 436 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 MUL1Q969V5 352 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 MED4Q9NPJ6 270 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 AKIP1Q9NQ31 210 aa11.76□□□□□ -0.53
PDLIM7-210ENST00000503827 LGALS9O00182 355 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 ITGB1BP1O14713 200 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 PDCD6O75340 191 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 SCAF4O95104 1147 aaKnown RBP11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 MGMTP16455 207 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 MAP2K4P45985 399 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 ATP6AP1Q15904 470 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 FAM209BQ5JX69 171 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 SLC25A30Q5SVS4 291 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 SIGIRRQ6IA17 410 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 STPG3Q8N7X2 389 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 LGALS12Q96DT0 336 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 CYYR1Q96J86 154 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 AGMATQ9BSE5 352 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 KRTAP4-5Q9BYR2 181 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 MFFQ9GZY8 342 aa11.75□□□□□ -0.53
PDLIM7-210ENST00000503827 GGCTO75223 188 aaKnown RBP11.74□□□□□ -0.53
PDLIM7-210ENST00000503827 CRTAPO75718 401 aaPredicted RBP11.74□□□□□ -0.53
PDLIM7-210ENST00000503827 GTF2A1P52655 376 aaPredicted RBP11.74□□□□□ -0.53
PDLIM7-210ENST00000503827 RBMS2Q15434 407 aaKnown RBP11.74□□□□□ -0.53
PDLIM7-210ENST00000503827 AWAT2Q6E213 333 aa11.74□□□□□ -0.53
PDLIM7-210ENST00000503827 ZNF383Q8NA42 475 aa11.74□□□□□ -0.53
PDLIM7-210ENST00000503827 C2CD4CQ8TF44 421 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms