RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SAXO1Q8IYX7 474 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 ZNF645Q8N7E2 425 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 PXMP4Q9Y6I8 212 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 VWA1Q6PCB0 445 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 DOLPP1Q86YN1 238 aa13.92□□□□□ -0.18
HMGXB3-202ENST00000503427 ACAA1P09110 424 aaPredicted RBP13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 LRRC75AQ8NAA5 344 aa13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 PAFAH1B2P68402 229 aa13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 SNAI3Q3KNW1 292 aa13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 SELENOHQ8IZQ5 122 aaKnown RBP13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 POM121Q96HA1 1249 aa13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 RIF1Q5UIP0 2472 aaKnown RBP13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 TAF15Q92804 592 aaKnown RBP eCLIP13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 ZMAT5Q9UDW3 170 aaKnown RBP13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 SVILO95425 2214 aa13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 NPIPB9F8W1W9 429 aa13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 RPL31P62899 125 aaKnown RBP13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 COA4Q9NYJ1 87 aa13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 NAGKQ9UJ70 344 aa13.91□□□□□ -0.18
HMGXB3-202ENST00000503427 SPTBP11277 2137 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 RPS11P62280 158 aaKnown RBP eCLIP13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 OR2D3Q8NGH3 330 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 GPR146Q96CH1 333 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 SIGLEC5O15389 551 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 TMEM116Q8NCL8 245 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 OPN3Q9H1Y3 402 aaPredicted RBP13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 HSPB8Q9UJY1 196 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 LOC101059948A0A1B0GTJ6 334 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 ZNF716A6NP11 495 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 K7N7A8 449 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 SNCGO76070 127 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 CTSSP25774 331 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 UCP3P55916 312 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 RPL30P62888 115 aaKnown RBP13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 EIF4E3Q8N5X7 224 aaKnown RBP13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 PRDM14Q9GZV8 571 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 FOXJ2Q9P0K8 574 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 SLC25A10Q9UBX3 287 aaPredicted RBP13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 MT-ND6P03923 174 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 PPOXP50336 477 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 LYRM7Q5U5X0 104 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 OR8I2Q8N0Y5 310 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 GCSAMQ8N6F7 178 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 PAXXQ9BUH6 204 aa13.9□□□□□ -0.18
HMGXB3-202ENST00000503427 RECKO95980 971 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 TRGC2P03986 189 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 HIST1H1BP16401 226 aaKnown RBP13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 FGFRL1Q8N441 504 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 TPRX1Q8N7U7 411 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 POC1AQ8NBT0 407 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 RBKSQ9H477 322 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 DLL3Q9NYJ7 618 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 CACNA1IQ9P0X4 2223 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 CXorf65A6NEN9 183 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 MPTX1A8MV57 137 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 CORTO00230 105 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 DANCRP0C864 163 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 OR52M1Q8NGK5 317 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 UFC1Q9Y3C8 167 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 PPIAL4EA0A075B759 164 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 A0A0G2JK05 382 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 LOC390937A0A1W2PQ73 354 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 SH2D7A6NKC9 451 aaPredicted RBP13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 PPIAL4DF5H284 164 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 NDUFB4O95168 129 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 PPIAL4FP0DN26 164 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 MPV17P39210 176 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 C10orf128Q5T292 105 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 ZNF788Q6ZQV5 615 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 VN1R17PQ8TDU5 208 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 AICDAQ9GZX7 198 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 CLEC5AQ9NY25 188 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 PPIAL4AQ9Y536 164 aa13.89□□□□□ -0.19
HMGXB3-202ENST00000503427 A0A1W2PPE3 182 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 A0A1W2PRD5 423 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 A0A1W2PRF3 423 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 A0A1W2PRM7 423 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 WNT5AP41221 380 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 ANKRD36A6QL64 1941 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 RPLP1P05386 114 aaKnown RBP13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 GP6Q9HCN6 339 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 PAM16Q9Y3D7 125 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 KLK2P20151 261 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 ZNF343Q6P1L6 599 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 MEGF10Q96KG7 1140 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 TBX15Q96SF7 602 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 SRXN1Q9BYN0 137 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 CHCHD2Q9Y6H1 151 aaPredicted RBP13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 DNAJC13O75165 2243 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 ORM1P02763 201 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 TMEM187Q14656 261 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 UBTD1Q9HAC8 227 aa13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 CNOT1A5YKK6 2376 aaKnown RBP13.88□□□□□ -0.19
HMGXB3-202ENST00000503427 CD99P14209 185 aa13.87□□□□□ -0.19
HMGXB3-202ENST00000503427 MS4A3Q96HJ5 214 aa13.87□□□□□ -0.19
HMGXB3-202ENST00000503427 OR4C12Q96R67 309 aa13.87□□□□□ -0.19
HMGXB3-202ENST00000503427 DIRC3C9JPN6 131 aa13.87□□□□□ -0.19
HMGXB3-202ENST00000503427 MELTFP08582 738 aa13.87□□□□□ -0.19
HMGXB3-202ENST00000503427 RSPO4Q2I0M5 234 aaPredicted RBP13.87□□□□□ -0.19
HMGXB3-202ENST00000503427 CISD1Q9NZ45 108 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms