RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 C6orf141Q5SZD1 244 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 ASPHD1Q5U4P2 390 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 GLT8D1Q68CQ7 371 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 SIGIRRQ6IA17 410 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 CD200R1LQ6Q8B3 271 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 FAM131AQ6UXB0 335 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 MOB1BQ7L9L4 216 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 OVCH2Q7RTZ1 564 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 PPP1R27Q86WC6 154 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 ODF3L1Q8IXM7 274 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 MS4A15Q8N5U1 240 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 KCNG3Q8TAE7 436 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 FAM46BQ96A09 425 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 RITA1Q96K30 269 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 CNOT2Q9NZN8 540 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 SLC23A1Q9UHI7 598 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 MGAT4AQ9UM21 535 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 STUB1Q9UNE7 303 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 WASHC3Q9Y3C0 194 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 NUBP2Q9Y5Y2 271 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 A3GALT2U3KPV4 340 aa8.6□□□□□ -1.03
UBE2D3-211ENST00000502404 DNAH9Q9NYC9 4486 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 PNMA8CA0A1B0GUJ8 204 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 ITGB1BP1O14713 200 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 LDLRAD4O15165 306 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 SLC22A1O15245 554 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 TFAP2AP05549 437 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 RANBP1P43487 201 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 SLURP1P55000 103 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 WNT4P56705 351 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 TPPP2P59282 170 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 HMGN3Q15651 99 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 UNQ5815/PRO19632Q6UWF5 114 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 ZNF562Q6V9R5 426 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 LYPD6Q86Y78 171 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 ANKRD13BQ86YJ7 626 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 SGPP2Q8IWX5 399 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 DHRSXQ8N5I4 330 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 ZNF485Q8NCK3 441 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 SETD6Q8TBK2 473 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 ARPC1AQ92747 370 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 GGHQ92820 318 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 TSNAXQ99598 290 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 FAAP24Q9BTP7 215 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 TMEM59Q9BXS4 323 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 FBXL15Q9H469 300 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 PLEKHJ1Q9NW61 149 aa8.59□□□□□ -1.03
UBE2D3-211ENST00000502404 IGHV4OR15-8A0A075B7B6 117 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 A0A087WW49 117 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 A0A0G2JLM5 398 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 ERICH4A6NGS2 130 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 HSPA12AO43301 675 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 ZP3P21754 424 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 ZBTB25P24278 435 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 RPS27AP62979 156 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 LRRC36Q1X8D7 754 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 MOGAT2Q3SYC2 334 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 C19orf54Q5BKX5 351 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 PACRGLQ8N7B6 248 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 PHYHIPQ92561 330 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 RBMXL1Q96E39 390 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 SULT4A1Q9BR01 284 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 ALX4Q9H161 411 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 IFI27L2Q9H2X8 130 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 RANGRFQ9HD47 186 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 ZNF221Q9UK13 617 aa8.58□□□□□ -1.04
UBE2D3-211ENST00000502404 C13orf42A0A1B0GVH6 325 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 H0Y980 276 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 H0YJW9 148 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 H3BUA1 57 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 SOX15O60248 233 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 SPDEFO95238 335 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 APOA2P02652 100 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 TRGV3P03979 118 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 CT45A6P0DMU7 189 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 CT45A5P0DMU8 189 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 CT45A7P0DMV0 189 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 CPEP16870 476 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 CEACAM6P40199 344 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 RPS16P62249 146 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 SRSF7Q16629 238 aaKnown RBP eCLIP8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 TATDN3Q17R31 274 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 C21orf62-AS1Q17RA5 79 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 ACSM3Q53FZ2 586 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 TM4SF20Q53R12 229 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 C1orf100Q5SVJ3 147 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 C6orf201Q7Z4U5 140 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 C8orf59Q8N0T1 100 aaPredicted RBP8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 LFNGQ8NES3 379 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 OR5AN1Q8NGI8 311 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 ISOC1Q96CN7 298 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 TMEM68Q96MH6 324 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 MS4A10Q96PG2 267 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 URM1Q9BTM9 101 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 ZNF355PQ9NSJ1 428 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 METTL1Q9UBP6 276 aaKnown RBP8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 PLA2G2DQ9UNK4 145 aa8.57□□□□□ -1.04
UBE2D3-211ENST00000502404 TRBV6-6A0A0A6YYG2 114 aa8.56□□□□□ -1.04
UBE2D3-211ENST00000502404 TRIM64CA6NLI5 447 aa8.56□□□□□ -1.04
UBE2D3-211ENST00000502404 FCN1O00602 326 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms