RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 DUX4L9Q6RFH8 374 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-210ENST00000498259 BTNL3Q6UXE8 466 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 ZNF841Q6ZN19 808 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 ACOT7LQ6ZUV0 252 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 LYZL2Q7Z4W2 148 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 SELENOHQ8IZQ5 122 aaKnown RBP6.96□□□□□ -1.3
SF3A1-210ENST00000498259 ZBTB8BQ8NAP8 495 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-210ENST00000498259 CLEC18CQ8NCF0 446 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 GRPEL2Q8TAA5 225 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 MFFQ9GZY8 342 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 TMEM133Q9H2Q1 129 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 SLA2Q9H6Q3 261 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 PLEKHA2Q9HB19 425 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 ZC4H2Q9NQZ6 224 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 COA4Q9NYJ1 87 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 DUX4Q9UBX2 424 aa6.96□□□□□ -1.3
SF3A1-210ENST00000498259 TANC2Q9HCD6 1990 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 A0A1W2PPR1 153 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 KANTRA0A1W2PQU2 76 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 FAM90A26D6RGX4 464 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 E5RGE8 158 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 F5H0A9 414 aaPredicted RBP6.95□□□□□ -1.3
SF3A1-210ENST00000498259 J3QR06 171 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 CCSO14618 274 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 ARPC5O15511 151 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 GPR137BO60478 399 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 IGLV2-14P01704 120 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 PLA2G2AP14555 144 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 NQO2P16083 231 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 S100A11P31949 105 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 DUTP33316 252 aaKnown RBP6.95□□□□□ -1.3
SF3A1-210ENST00000498259 LPAR6P43657 344 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 NKX2-1P43699 371 aaPredicted RBP6.95□□□□□ -1.3
SF3A1-210ENST00000498259 RAB13P51153 203 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 S100A10P60903 97 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 VAMP2P63027 116 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 ZNF273Q14593 569 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 C2orf68Q2NKX9 166 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 LRRC37A5PQ49AS3 106 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 CT45A1Q5HYN5 189 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 PRAMEF5Q5TYX0 476 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 NCR3LG1Q68D85 454 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 H2BFWTQ7Z2G1 175 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 ABHD12Q8N2K0 398 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 FGFRL1Q8N441 504 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 LY6G5BQ8NDX9 201 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 BEND2Q8NDZ0 799 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 OR1S1Q8NH92 325 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 CT45A3Q8NHU0 189 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 DCUN1D4Q92564 292 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 WDR89Q96FK6 387 aaPredicted RBP6.95□□□□□ -1.3
SF3A1-210ENST00000498259 CLCC1Q96S66 551 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 PCGF1Q9BSM1 259 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 CLEC7AQ9BXN2 247 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 GSX2Q9BZM3 304 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.95□□□□□ -1.3
SF3A1-210ENST00000498259 ONECUT1Q9UBC0 465 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 ITGB1BP2Q9UKP3 347 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 PAIP2BQ9ULR5 123 aaKnown RBP6.95□□□□□ -1.3
SF3A1-210ENST00000498259 NSG2Q9Y328 171 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 MMP24Q9Y5R2 645 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 KPTNQ9Y664 436 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 CACNA1DQ01668 2161 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 ARFGEF3Q5TH69 2177 aa6.95□□□□□ -1.3
SF3A1-210ENST00000498259 SMLR1H3BR10 107 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 TAAR5O14804 337 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 RBMXL2O75526 392 aaKnown RBP6.94□□□□□ -1.3
SF3A1-210ENST00000498259 IGHV2-5P01817 119 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 SLC25A16P16260 332 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 CCL3L1P16619 93 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 GNG10P50151 68 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 AP2S1P53680 142 aaPredicted RBP6.94□□□□□ -1.3
SF3A1-210ENST00000498259 RPP30P78346 268 aaKnown RBP6.94□□□□□ -1.3
SF3A1-210ENST00000498259 GPR157Q5UAW9 335 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 EIF5AL1Q6IS14 154 aaKnown RBP6.94□□□□□ -1.3
SF3A1-210ENST00000498259 TCF23Q7RTU1 214 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 C5orf24Q7Z6I8 188 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 FAM71E2Q8N5Q1 922 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 ZNF439Q8NDP4 499 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 DMBX1Q8NFW5 382 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 VSTM2AQ8TAG5 236 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 IGFBPL1Q8WX77 278 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 MARVELD3Q96A59 401 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 OR10C1Q96KK4 312 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 CIB3Q96Q77 187 aaPredicted RBP6.94□□□□□ -1.3
SF3A1-210ENST00000498259 RAB40CQ96S21 281 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 SLC25A31Q9H0C2 315 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 IFI27L2Q9H2X8 130 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 BEX4Q9NWD9 120 aaPredicted RBP6.94□□□□□ -1.3
SF3A1-210ENST00000498259 FKBP11Q9NYL4 201 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 POMT1Q9Y6A1 747 aa6.94□□□□□ -1.3
SF3A1-210ENST00000498259 SPTBN1Q01082 2364 aaKnown RBP6.94□□□□□ -1.3
SF3A1-210ENST00000498259 SAA2-SAA4A0A096LPE2 208 aa6.93□□□□□ -1.3
SF3A1-210ENST00000498259 MEX3AA1L020 520 aaKnown RBP6.93□□□□□ -1.3
SF3A1-210ENST00000498259 A1L4Q6 167 aa6.93□□□□□ -1.3
SF3A1-210ENST00000498259 A8MXK9 166 aa6.93□□□□□ -1.3
SF3A1-210ENST00000498259 K7EPK0 472 aa6.93□□□□□ -1.3
SF3A1-210ENST00000498259 FCGR3BO75015 233 aa6.93□□□□□ -1.3
SF3A1-210ENST00000498259 DEDDO75618 318 aa6.93□□□□□ -1.3
SF3A1-210ENST00000498259 LY6HO94772 140 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms