RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 GLAP06280 429 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 OR8U9P0C7N5 309 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 SMIM18P0DKX4 95 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 SELLP14151 372 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 GNB3P16520 340 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 CCL3L1P16619 93 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 VDAC1P21796 283 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 COX7A1P24310 79 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 CNTFRP26992 372 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 PSMB8P28062 276 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 EPHA2P29317 976 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 CD40LGP29965 261 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 GLP1RP43220 463 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 CEBPDP49716 269 aaPredicted RBP2.98□□□□□ -1.93
USP54-217ENST00000498213 DAPP51397 102 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 RAB25P57735 213 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 GNB1P62873 340 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 ADARB1P78563 741 aaKnown RBP2.98□□□□□ -1.93
USP54-217ENST00000498213 GPR176Q14439 515 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 GRK1Q15835 563 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 ZFP69Q49AA0 526 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 ABCA11PQ4W5N1 156 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 SLC25A30Q5SVS4 291 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 ZC2HC1BQ5TFG8 222 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 FAM71F2Q6NXP2 309 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 FAHD1Q6P587 224 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 ZNF322Q6U7Q0 402 aaPredicted RBP2.98□□□□□ -1.93
USP54-217ENST00000498213 SLC35E3Q7Z769 313 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 LHFPL4Q7Z7J7 247 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 TRAPPC6BQ86SZ2 158 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 LAX1Q8IWV1 398 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 FAM58AQ8N1B3 248 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 PXT1Q8NFP0 134 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 OR4M1Q8NGD0 313 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 OR9Q2Q8NGE9 314 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 OR51T1Q8NGJ9 327 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 OR8D4Q8NGM9 314 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 OR51E1Q8TCB6 317 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 GIPC3Q8TF64 312 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 C17orf50Q8WW18 174 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 RORBQ92753 470 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 EMG1Q92979 244 aaKnown RBP2.98□□□□□ -1.93
USP54-217ENST00000498213 TOMM40LQ969M1 308 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 FLYWCH2Q96CP2 140 aaKnown RBP2.98□□□□□ -1.93
USP54-217ENST00000498213 MRPS24Q96EL2 167 aaKnown RBP2.98□□□□□ -1.93
USP54-217ENST00000498213 TEAD3Q99594 435 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 RNF5Q99942 180 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 CENPOQ9BU64 300 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 C9orf16Q9BUW7 83 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 CST11Q9H112 138 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 OR51V1Q9H2C8 321 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 RIBC2Q9H4K1 309 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 HMG20AQ9NP66 347 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 EXOSC4Q9NPD3 245 aaKnown RBP2.98□□□□□ -1.93
USP54-217ENST00000498213 SIGLEC8Q9NYZ4 499 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 OR52A1Q9UKL2 312 aa2.98□□□□□ -1.93
USP54-217ENST00000498213 LRP1BQ9NZR2 4599 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 SEC14L6B5MCN3 397 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 G3V2T6 193 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 H0Y980 276 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 H0YJX3 145 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 J3QR06 171 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 DENRO43583 198 aaKnown RBP2.97□□□□□ -1.93
USP54-217ENST00000498213 ENTPD6O75354 484 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 MOSP00540 346 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 HCKP08631 526 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 OCM2P0CE71 109 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 OCMP0CE72 109 aaPredicted RBP2.97□□□□□ -1.93
USP54-217ENST00000498213 CGB3P0DN86 165 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 CGB7P0DN87 165 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 TMEM11P17152 192 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 GABRR1P24046 479 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 CDK2P24941 298 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 PAX6P26367 422 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 CAPGP40121 348 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 RPS27P42677 84 aaKnown RBP2.97□□□□□ -1.93
USP54-217ENST00000498213 OR3A1P47881 315 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 ALDH3A2P51648 485 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 MTCP1P56278 107 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 TMEM267Q0VDI3 215 aaPredicted RBP2.97□□□□□ -1.93
USP54-217ENST00000498213 PDZK1IP1Q13113 114 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 GPR50Q13585 617 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 GINS1Q14691 196 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 PTGES3Q15185 160 aaKnown RBP2.97□□□□□ -1.93
USP54-217ENST00000498213 TBCEQ15813 527 aaPredicted RBP2.97□□□□□ -1.93
USP54-217ENST00000498213 MPV17LQ2QL34 196 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 KIAA1644Q3SXP7 199 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 MEDAGQ5VYS4 303 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 GLT8D1Q68CQ7 371 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 KDM4DQ6B0I6 523 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 FAM53AQ6NSI3 398 aaPredicted RBP2.97□□□□□ -1.93
USP54-217ENST00000498213 LINC00336Q6ZUF6 198 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 SLC25A26Q70HW3 274 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 Q75L30 129 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 TCF23Q7RTU1 214 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 FAM220AQ7Z4H9 259 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 CDH26Q8IXH8 852 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 DYNAPQ8N1N2 210 aa2.97□□□□□ -1.93
USP54-217ENST00000498213 Q8N6K4 173 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms