RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 RFPL4AL1F8VTS6 287 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 ARL6IP5O75915 188 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 IGHV1-69P01742 117 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 ZNF705DP0CH99 300 aaPredicted RBP0.62□□□□□ -2.31
SMC4-227ENST00000497984 ZNF705BP0CI00 300 aaPredicted RBP0.62□□□□□ -2.31
SMC4-227ENST00000497984 AGTR1P30556 359 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 OR10J1P30954 320 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 STC1P52823 247 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 HERVK_113P63121 156 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 PRB3Q04118 309 aaPredicted RBP0.62□□□□□ -2.31
SMC4-227ENST00000497984 SYCP1Q15431 976 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 ZNF791Q3KP31 576 aaPredicted RBP0.62□□□□□ -2.31
SMC4-227ENST00000497984 AMTNQ6UX39 209 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 LHFPL1Q86WI0 220 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 LRRC28Q86X40 367 aaPredicted RBP0.62□□□□□ -2.31
SMC4-227ENST00000497984 CCDC12Q8WUD4 166 aaPredicted RBP0.62□□□□□ -2.31
SMC4-227ENST00000497984 PPWD1Q96BP3 646 aaKnown RBP0.62□□□□□ -2.31
SMC4-227ENST00000497984 SLC35G5Q96KT7 338 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 MIEN1Q9BRT3 115 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 ASCL3Q9NQ33 180 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 UBQLN4Q9NRR5 601 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 GLS2Q9UI32 602 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 CACNA1SQ13698 1873 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 NCKAP5O14513 1909 aa0.62□□□□□ -2.31
SMC4-227ENST00000497984 FN1P02751 2386 aaKnown RBP0.61□□□□□ -2.31
SMC4-227ENST00000497984 TRGV5A0A0B4J1U4 118 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 TRAV41A0A0B4J266 112 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 A0A1W2PQD3 144 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 MRASO14807 208 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 ADAP1O75689 374 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 HBZP02008 142 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 C1QCP02747 245 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 TPM1P09493 284 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 ETV1P50549 477 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 IDH3GP51553 393 aaPredicted RBP0.61□□□□□ -2.31
SMC4-227ENST00000497984 TAS2R45P59539 299 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 ERHP84090 104 aaKnown RBP0.61□□□□□ -2.31
SMC4-227ENST00000497984 SLC38A11Q08AI6 406 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 TMEM267Q0VDI3 215 aaPredicted RBP0.61□□□□□ -2.31
SMC4-227ENST00000497984 XRCC4Q13426 336 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 EXOC3L4Q17RC7 722 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 DRAM2Q6UX65 266 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 SCGB1D4Q6XE38 83 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 ATP5L2Q7Z4Y8 100 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 SPATA12Q7Z6I5 190 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 SLC13A5Q86YT5 568 aaPredicted RBP0.61□□□□□ -2.31
SMC4-227ENST00000497984 BLIDQ8IZY5 108 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 CLDND2Q8NHS1 167 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 RPS4Y2Q8TD47 263 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 CYGBQ8WWM9 190 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 ASB17Q8WXJ9 295 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 C19orf60Q96EN9 201 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 NKX6-2Q9C056 277 aaPredicted RBP0.61□□□□□ -2.31
SMC4-227ENST00000497984 SLC2A9Q9NRM0 540 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 NPATQ14207 1427 aa0.61□□□□□ -2.31
SMC4-227ENST00000497984 NUP153P49790 1475 aaKnown RBP0.61□□□□□ -2.31
SMC4-227ENST00000497984 DISP1Q96F81 1524 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 KDM5BQ9UGL1 1544 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 ZNF879B4DU55 563 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 LIN7AO14910 233 aaPredicted RBP0.6□□□□□ -2.31
SMC4-227ENST00000497984 UBE2L6O14933 153 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 PSMG1O95456 288 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 BPGMP07738 259 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 RD3LP0DJH9 198 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 PVALBP20472 110 aaPredicted RBP0.6□□□□□ -2.31
SMC4-227ENST00000497984 CD24P25063 80 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 CA7P43166 264 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 CDK9P50750 372 aaKnown RBP0.6□□□□□ -2.31
SMC4-227ENST00000497984 TAS2R30P59541 319 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 DAD1P61803 113 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 C4orf26Q17RF5 130 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 LGALS9BQ3B8N2 356 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 HSP90B2PQ58FF3 399 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 PABPC1L2AQ5JQF8 200 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 LCN8Q6JVE9 175 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 SLC35E3Q7Z769 313 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 C1orf174Q8IYL3 243 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 NATD1Q8N6N6 113 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 PACRGLQ8N7B6 248 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 DAND5Q8N907 189 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 OR2D3Q8NGH3 330 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 OR5J2Q8NH18 312 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 RNASE6Q93091 150 aaKnown RBP0.6□□□□□ -2.31
SMC4-227ENST00000497984 OR7D2Q96RA2 312 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 ACBD6Q9BR61 282 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 TMEM208Q9BTX3 173 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 HHLA3Q9XRX5 114 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 SOX21Q9Y651 276 aaPredicted RBP0.6□□□□□ -2.31
SMC4-227ENST00000497984 MAP3K19Q56UN5 1328 aa0.6□□□□□ -2.31
SMC4-227ENST00000497984 TMEM94Q12767 1356 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 FBN2P35556 2912 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 F8W036 122 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 MKRN2OSH3BPM6 223 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 GOLGA8RI6L899 631 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 BHLHE40O14503 412 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 GSTZ1O43708 216 aaPredicted RBP0.59□□□□□ -2.31
SMC4-227ENST00000497984 PGLYRP1O75594 196 aaPredicted RBP0.59□□□□□ -2.31
SMC4-227ENST00000497984 GRPRP30550 384 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 KDELR2P33947 212 aa0.59□□□□□ -2.31
SMC4-227ENST00000497984 HADHBP55084 474 aaKnown RBP0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms