RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CABLES2Q9BTV7 478 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 OR1A1Q9P1Q5 309 aa12.19□□□□□ -0.46
NUP50-219ENST00000497960 IGHV3-72A0A0B4J1Y9 119 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 BET1O15155 118 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 SLC31A2O15432 143 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 GSTT2P0CG29 244 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 GSTT2BP0CG30 244 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 CD83Q01151 205 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 EBI3Q14213 229 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 CNPY1Q3B7I2 92 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 CT45A1Q5HYN5 189 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 PYHIN1Q6K0P9 492 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 FAM131AQ6UXB0 335 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 TGIF2LXQ8IUE1 241 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 C5orf56Q8N8D9 126 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 ZNF439Q8NDP4 499 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 OR4X2Q8NGF9 303 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 OR2T10Q8NGZ9 312 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 CT45A3Q8NHU0 189 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 RTN4IP1Q8WWV3 396 aaPredicted RBP12.18□□□□□ -0.46
NUP50-219ENST00000497960 ST6GALNAC6Q969X2 333 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 GINS4Q9BRT9 223 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 ABHD14AQ9BUJ0 271 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 SCPEP1Q9HB40 452 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 RABL2AQ9UBK7 228 aaPredicted RBP12.18□□□□□ -0.46
NUP50-219ENST00000497960 RABL2BQ9UNT1 228 aa12.18□□□□□ -0.46
NUP50-219ENST00000497960 IGKV1D-8A0A087WSZ0 117 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 TCRBV4S1A1TA0A5B7 111 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 NCBP2LA6PVI3 153 aaKnown RBP12.17□□□□□ -0.46
NUP50-219ENST00000497960 SULT1C2O00338 296 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 YPEL1O60688 119 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 TPPPO94811 219 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 ZBTB25P24278 435 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 CD1BP29016 333 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 TNFSF8P32971 234 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 ZNF134P52741 427 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 ZNF137PP52743 207 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 MRPS10P82664 201 aaKnown RBP12.17□□□□□ -0.46
NUP50-219ENST00000497960 MORN2Q502X0 79 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 IGSF11Q5DX21 431 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 HOGA1Q86XE5 327 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 OR2AK2Q8NG84 335 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 OR10J5Q8NHC4 309 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 EAF1Q96JC9 268 aaPredicted RBP12.17□□□□□ -0.46
NUP50-219ENST00000497960 YPEL2Q96QA6 119 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 ANXA10Q9UJ72 324 aa12.17□□□□□ -0.46
NUP50-219ENST00000497960 IGKV1-6A0A0C4DH72 117 aa12.16□□□□□ -0.46
NUP50-219ENST00000497960 A0A1W2PRX2 142 aa12.16□□□□□ -0.46
NUP50-219ENST00000497960 FABP12A6NFH5 140 aa12.16□□□□□ -0.46
NUP50-219ENST00000497960 DIRAS3O95661 229 aa12.16□□□□□ -0.46
NUP50-219ENST00000497960 MOSP00540 346 aa12.16□□□□□ -0.46
NUP50-219ENST00000497960 RCVRNP35243 200 aa12.16□□□□□ -0.46
NUP50-219ENST00000497960 C1QL4Q86Z23 238 aa12.16□□□□□ -0.46
NUP50-219ENST00000497960 GPX8Q8TED1 209 aa12.16□□□□□ -0.46
NUP50-219ENST00000497960 EDARADDQ8WWZ3 215 aa12.16□□□□□ -0.46
NUP50-219ENST00000497960 SNAPC3Q92966 411 aa12.16□□□□□ -0.46
NUP50-219ENST00000497960 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
NUP50-219ENST00000497960 PSMB11A5LHX3 300 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 ADARB2-AS1A8MUL3 147 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 LANCL1O43813 399 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 CTXN2P0C2S0 81 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 CEACAM6P40199 344 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 ACTBP60709 375 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 PDLIM3Q53GG5 364 aaPredicted RBP12.15□□□□□ -0.46
NUP50-219ENST00000497960 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 SPANXN2Q5MJ10 180 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 OR6Q1Q8NGQ2 317 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 OR52I2Q8NH67 350 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 CHPT1Q8WUD6 406 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 ABHD1Q96SE0 405 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 NECAP2Q9NVZ3 263 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 RDH8Q9NYR8 311 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 PTTG2Q9NZH5 202 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 ANAPC10Q9UM13 185 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 MEGF8Q7Z7M0 2845 aa12.15□□□□□ -0.46
NUP50-219ENST00000497960 PLXNB1O43157 2135 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 TRBV6-7A0A0A0MS04 114 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 GABARAPH6UMI1 98 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 ST8SIA5O15466 376 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 PF4V1P10720 104 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 TAS2R46P59540 309 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 DGCR2P98153 550 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 TCTEX1D4Q5JR98 221 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 LY6G6FQ5SQ64 297 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 SLC35E3Q7Z769 313 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 CCDC190Q86UF4 302 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 FOXRED2Q8IWF2 684 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 Q8N6K4 173 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 OR8H1Q8NGG4 311 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 SMIM4Q8WVI0 70 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 FCAMRQ8WWV6 532 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 PARP12Q9H0J9 701 aaKnown RBP12.14□□□□□ -0.47
NUP50-219ENST00000497960 LIN7CQ9NUP9 197 aaKnown RBP12.14□□□□□ -0.47
NUP50-219ENST00000497960 V9GYH0 126 aa12.14□□□□□ -0.47
NUP50-219ENST00000497960 ZNF736B4DX44 427 aaPredicted RBP12.13□□□□□ -0.47
NUP50-219ENST00000497960 CTDSPLO15194 276 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 IGHG2P01859 326 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 OR3A3P47888 321 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 SLC35B1P78383 322 aa12.13□□□□□ -0.47
NUP50-219ENST00000497960 CDK10Q15131 360 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms