RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 TRBV5-7A0A0A0MS05 114 aa5.1□□□□□ -1.59
USF3-204ENST00000496826 TRGV5A0A0B4J1U4 118 aa5.1□□□□□ -1.59
USF3-204ENST00000496826 TRAV2A0A0B4J234 112 aa5.1□□□□□ -1.59
USF3-204ENST00000496826 ZNF729A6NN14 1252 aaPredicted RBP5.1□□□□□ -1.59
USF3-204ENST00000496826 PDE6HQ13956 83 aa5.1□□□□□ -1.59
USF3-204ENST00000496826 ECSCRQ19T08 205 aa5.1□□□□□ -1.59
USF3-204ENST00000496826 FAM78AQ5JUQ0 283 aa5.1□□□□□ -1.59
USF3-204ENST00000496826 SUSD4Q5VX71 490 aa5.1□□□□□ -1.59
USF3-204ENST00000496826 SIGLEC15Q6ZMC9 328 aa5.1□□□□□ -1.59
USF3-204ENST00000496826 RNF5Q99942 180 aa5.1□□□□□ -1.59
USF3-204ENST00000496826 ST6GALNAC4Q9H4F1 302 aa5.1□□□□□ -1.59
USF3-204ENST00000496826 A0A1B0GX51 115 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 KNCNA6PVL3 124 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 SYS1Q8N2H4 156 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 OR9G1Q8NH87 305 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 SCMH1Q96GD3 660 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 CXorf36Q9H7Y0 433 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 GAGE12JA6NER3 117 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 NPIPB8E9PQR5 432 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 NPIPB9F8W1W9 429 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 ATP5EP56381 51 aaPredicted RBP5.09□□□□□ -1.59
USF3-204ENST00000496826 GAGE1Q13065 139 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 GAGE4Q13068 117 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 GAGE5Q13069 117 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 GAGE6Q13070 117 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 IL15RAQ13261 267 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 CD300EQ496F6 205 aaPredicted RBP5.09□□□□□ -1.59
USF3-204ENST00000496826 FHL5Q5TD97 284 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 LINC00696Q6ZRV3 163 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 IL17RELQ6ZVW7 336 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 DEFB108BQ8NET1 73 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 MCRIP2Q9BUT9 160 aaKnown RBP5.09□□□□□ -1.59
USF3-204ENST00000496826 LAT2Q9GZY6 243 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 MAST1Q9Y2H9 1570 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.09□□□□□ -1.59
USF3-204ENST00000496826 IQGAP3Q86VI3 1631 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 LAGE3Q14657 143 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 NNATQ16517 81 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 GGTA1PQ4G0N0 100 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 GAGE13Q4V321 117 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 FBLN7Q53RD9 439 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 SLC25A48Q6ZT89 311 aaKnown RBP5.09□□□□□ -1.59
USF3-204ENST00000496826 HIST1H2BAQ96A08 127 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 GNB1LQ9BYB4 327 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 ZMAT4Q9H898 229 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 ST20Q9HBF5 79 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 TREX1Q9NSU2 369 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 FUT9Q9Y231 359 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 FRG2CA6NGY1 282 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 INSM1Q01101 510 aaPredicted RBP5.09□□□□□ -1.59
USF3-204ENST00000496826 RGNQ15493 299 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 BMPERQ8N8U9 685 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 AKAP6Q13023 2319 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 HBDP02042 147 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 DSCR9P59020 149 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 KLF9Q13886 244 aaPredicted RBP5.09□□□□□ -1.59
USF3-204ENST00000496826 CENPWQ5EE01 88 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 GLCCI1Q86VQ1 547 aa5.09□□□□□ -1.59
USF3-204ENST00000496826 MED19A0JLT2 244 aaPredicted RBP5.09□□□□□ -1.6
USF3-204ENST00000496826 SHISA7A6NL88 538 aa5.09□□□□□ -1.6
USF3-204ENST00000496826 CCL3L1P16619 93 aa5.09□□□□□ -1.6
USF3-204ENST00000496826 C2orf82Q6UX34 121 aa5.09□□□□□ -1.6
USF3-204ENST00000496826 CIARTQ8N365 385 aaPredicted RBP5.09□□□□□ -1.6
USF3-204ENST00000496826 LYZL4Q96KX0 146 aa5.09□□□□□ -1.6
USF3-204ENST00000496826 OR2H1Q9GZK4 316 aa5.09□□□□□ -1.6
USF3-204ENST00000496826 ADGBQ8N7X0 1667 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 ZBTB42B2RXF5 422 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 C1orf105O95561 183 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 ACYP1P07311 99 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 CD68P34810 354 aaPredicted RBP5.08□□□□□ -1.6
USF3-204ENST00000496826 HTR6P50406 440 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 DCAF12L1Q5VU92 463 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 WFDC3Q8IUB2 231 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 TMEM174Q8WUU8 243 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 YPEL2Q96QA6 119 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 GMLQ99445 158 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 TRAV27A0A087WT01 109 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 KLK10O43240 276 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 KRTCAP3Q53RY4 240 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 IBA57Q5T440 356 aaKnown RBP5.08□□□□□ -1.6
USF3-204ENST00000496826 ZNF683Q8IZ20 524 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 KCNK17Q96T54 332 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 IL36RNQ9UBH0 155 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 PILRAQ9UKJ1 303 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 TRBV4-1A0A0J9YWV2 114 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 FRS3O43559 492 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 CST7O76096 145 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 CST5P28325 142 aaPredicted RBP5.08□□□□□ -1.6
USF3-204ENST00000496826 ZNF252P-AS1Q0IIN9 211 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 TMEM255AQ5JRV8 349 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 FAM90A2PQ658T7 463 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 ZNF880Q6PDB4 577 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 LINC01551Q86U37 167 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 MUSTN1Q8IVN3 82 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 WFDC9Q8NEX5 89 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 TMEM167AQ8TBQ9 72 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 RNASEH2CQ8TDP1 164 aaKnown RBP5.08□□□□□ -1.6
USF3-204ENST00000496826 MS4A3Q96HJ5 214 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 DTLQ9NZJ0 730 aa5.08□□□□□ -1.6
USF3-204ENST00000496826 KLF2Q9Y5W3 355 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms