RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	CYP2G1P	Q6ZSU1	146 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	SSX9	Q7RTT3	188 aa		11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.33	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	NPIPB11	E5RHQ5	1161 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	KBTBD11	O94819	623 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	IL18BP	O95998	194 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CELA3B	P08861	270 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	BMP5	P22003	454 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	GPX4	P36969	197 aa	Predicted RBP	11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	SLC10A1	Q14973	349 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	DCAF10	Q5QP82	559 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	FBXW9	Q5XUX1	488 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	H2BFWT	Q7Z2G1	175 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	UBALD2	Q8IYN6	164 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	OR52L2P	Q8NGH6	319 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	GATAD1	Q8WUU5	269 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TMEM37	Q8WXS4	190 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PARL	Q9H300	379 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PRDM13	Q9H4Q3	707 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	GPR179	Q6PRD1	2367 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CTXND1	A0A1B0GTU2	59 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TMEM30CP	A0ZSE6	113 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	XKRY2	A2RUG3	117 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	HAND1	O96004	215 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	LTC4S	Q16873	150 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	DTD1	Q8TEA8	209 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	RYDEN	Q9NUL5	291 aa	Known RBP	11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	FAM90A26	D6RGX4	464 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PAGE4	O60829	102 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	S1PR2	O95136	353 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	MB	P02144	154 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	AES	Q08117	197 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ALKBH6	Q3KRA9	238 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	FAM53A	Q6NSI3	398 aa	Predicted RBP	11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	WDR86	Q86TI4	376 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	MEGF10	Q96KG7	1140 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PCGF1	Q9BSM1	259 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	SRD5A3	Q9H8P0	318 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071	USF3	Q68DE3	2245 aa		11.32	□□□□□ -0.6
SUPT20H-222	ENST00000495071		A0A087X0M5	115 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071		A0A1B0GX30	115 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ZG16	O60844	167 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	IFNA10	P01566	189 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	DEFA4	P12838	97 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	RPL23	P62829	140 aa	Known RBP	11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	COL10A1	Q03692	680 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ZNF600	Q6ZNG1	722 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ZNF645	Q8N7E2	425 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ZDHHC16	Q969W1	377 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ZPBP	Q9BS86	351 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	NCOR1	O75376	2440 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ARHGAP21	Q5T5U3	1957 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ODAM	A1E959	279 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PKIA	P61925	76 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CST9LP1	Q5W188	147 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TMEM14EP	Q6UXP3	125 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	RFESD	Q8TAC1	157 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	MRGPRD	Q8TDS7	321 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	FOXJ2	Q9P0K8	574 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	IGHV3-43	A0A0B4J1X8	118 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	KLRC4-KLRK1	H3BQV0	150 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	IGHV3-43D	P0DP04	118 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	HOXA6	P31267	233 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TFF3	Q07654	80 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ZNF826P	Q6ZT77	177 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	SLC25A40	Q8TBP6	338 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	BCL2L2	Q92843	193 aa	Predicted RBP	11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	RAB24	Q969Q5	203 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ELOVL1	Q9BW60	279 aa		11.31	□□□□□ -0.6
SUPT20H-222	ENST00000495071	LRRC30	A6NM36	301 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	DEFB108A	A8MXU0	73 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	DDT	P30046	118 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	UBE2G2	P60604	165 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	RPL30	P62888	115 aa	Known RBP	11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ATP6V1F	Q16864	119 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TMEM183A	Q8IXX5	376 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TPRX1	Q8N7U7	411 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	C12orf77	C9JDV5	145 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	WNT9B	O14905	357 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	LYZL6	O75951	148 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	CHRNA7	P36544	502 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TGFBR3	Q03167	851 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	USF2	Q15853	346 aa	Predicted RBP	11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ACSF3	Q4G176	576 aa	Predicted RBP	11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	GCNT2	Q8N0V5	402 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	SDSL	Q96GA7	329 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PLPPR2	Q96GM1	343 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	TIMM9	Q9Y5J7	89 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	C17orf98	A8MV24	154 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	C9orf172	C9J069	976 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	PSPN	O60542	156 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	HBZ	P02008	142 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	ARG2	P78540	354 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	OR1P1	Q8NH06	330 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	NEIL1	Q96FI4	390 aa	Predicted RBP	11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	WDYHV1	Q96HA8	205 aa		11.3	□□□□□ -0.6
SUPT20H-222	ENST00000495071	HSPB7	Q9UBY9	170 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms