RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 OR2T6Q8NHC8 308 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 ZNF747Q9BV97 191 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 PRSS22Q9GZN4 317 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 OR2D2Q9H210 308 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 IFT46Q9NQC8 304 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 SDHAF2Q9NX18 166 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 ADAM30Q9UKF2 790 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 MOB4Q9Y3A3 225 aa10.79□□□□□ -0.68
COL1A1-208ENST00000494334 RBM7Q9Y580 266 aaKnown RBP10.79□□□□□ -0.68
COL1A1-208ENST00000494334 SH2D7A6NKC9 451 aaPredicted RBP10.78□□□□□ -0.68
COL1A1-208ENST00000494334 M0QZK8 103 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 ZNF701M0R085 212 aaPredicted RBP10.78□□□□□ -0.68
COL1A1-208ENST00000494334 HAX1O00165 279 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 TUSC2O75896 110 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 NAT1P18440 290 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 LINC00205P59089 165 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 KRTAP10-3P60369 221 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 ABCA11PQ4W5N1 156 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 C11orf88Q6PI97 169 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 C5orf56Q8N8D9 126 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 DRAXINQ8NBI3 349 aaPredicted RBP10.78□□□□□ -0.68
COL1A1-208ENST00000494334 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.78□□□□□ -0.68
COL1A1-208ENST00000494334 OR5AP2Q8NGF4 316 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 OR5AN1Q8NGI8 311 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 C5orf30Q96GV9 206 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 RITA1Q96K30 269 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 C6orf62Q9GZU0 229 aaPredicted RBP10.78□□□□□ -0.68
COL1A1-208ENST00000494334 NXF2Q9GZY0 626 aaKnown RBP10.78□□□□□ -0.68
COL1A1-208ENST00000494334 SCPEP1Q9HB40 452 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 PLSCR3Q9NRY6 295 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 NECAP2Q9NVZ3 263 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 OR2W1Q9Y3N9 320 aa10.78□□□□□ -0.68
COL1A1-208ENST00000494334 IGKV1D-13A0A0B4J2D9 117 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 H0YJW9 148 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 SULT1C2O00338 296 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 FGF16O43320 207 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 TPPPO94811 219 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 OR5H8P0DN80 308 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 IGKV1-13P0DP09 117 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 LUMP51884 338 aaPredicted RBP10.77□□□□□ -0.69
COL1A1-208ENST00000494334 F2RL1P55085 397 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 LYSMD2Q8IV50 215 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 Q8N9W7 124 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 ZNF383Q8NA42 475 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 WFDC12Q8WWY7 111 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 ABHD1Q96SE0 405 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 DCUN1D5Q9BTE7 237 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 SERTAD4Q9NUC0 356 aa10.77□□□□□ -0.69
COL1A1-208ENST00000494334 OR5H14A6NHG9 310 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 NCBP2LA6PVI3 153 aaKnown RBP10.76□□□□□ -0.69
COL1A1-208ENST00000494334 M0R1X1 148 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 FCGR2CP31995 323 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 MC5RP33032 325 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 SRSF4Q08170 494 aaKnown RBP10.76□□□□□ -0.69
COL1A1-208ENST00000494334 CDK10Q15131 360 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 FAM131AQ6UXB0 335 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 OVCH2Q7RTZ1 564 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 OR8H1Q8NGG4 311 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 MCFD2Q8NI22 146 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 GIMAP1Q8WWP7 306 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 DIRAS2Q96HU8 199 aa10.76□□□□□ -0.69
COL1A1-208ENST00000494334 DPPA5A6NC42 116 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 IGLV2-14P01704 120 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 PMP2P02689 132 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 AADACP22760 399 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 CNTFRP26992 372 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 HLA-DMAP28067 261 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 RFX2P48378 723 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 ACTBP60709 375 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 TMEM95Q3KNT9 176 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 RNASE12Q5GAN4 147 aaKnown RBP10.75□□□□□ -0.69
COL1A1-208ENST00000494334 C9orf152Q5JTZ5 239 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 SHISA2Q6UWI4 295 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 ZNF645Q8N7E2 425 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 C15orf40Q8WUR7 153 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 NDUFA13Q9P0J0 144 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 KLK11Q9UBX7 282 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 WASHC3Q9Y3C0 194 aa10.75□□□□□ -0.69
COL1A1-208ENST00000494334 H7C2Y5 167 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 SLC22A5O76082 557 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 PPYP01298 95 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 TNFSF8P32971 234 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 DUTP33316 252 aaKnown RBP10.74□□□□□ -0.69
COL1A1-208ENST00000494334 RCVRNP35243 200 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 VDAC2P45880 294 aaPredicted RBP10.74□□□□□ -0.69
COL1A1-208ENST00000494334 TAS2R46P59540 309 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 DYRK1AQ13627 763 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 MMDQ15546 238 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 ARSJQ5FYB0 599 aaPredicted RBP10.74□□□□□ -0.69
COL1A1-208ENST00000494334 DHRS11Q6UWP2 260 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 FAM71E2Q8N5Q1 922 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 KLHDC1Q8N7A1 406 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 OR5H2Q8NGV7 314 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 OR52I2Q8NH67 350 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 DGCR14Q96DF8 476 aaKnown RBP10.74□□□□□ -0.69
COL1A1-208ENST00000494334 CITED1Q99966 193 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 WNT10AQ9GZT5 417 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 LIN7CQ9NUP9 197 aaKnown RBP10.74□□□□□ -0.69
COL1A1-208ENST00000494334 EHFQ9NZC4 300 aa10.74□□□□□ -0.69
COL1A1-208ENST00000494334 STAB1Q9NY15 2570 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms