RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 NICN1Q9BSH3 213 aa13.33□□□□□ -0.28
COL9A1-210ENST00000493682 TMEM59Q9BXS4 323 aa13.33□□□□□ -0.28
COL9A1-210ENST00000493682 SLA2Q9H6Q3 261 aa13.33□□□□□ -0.28
COL9A1-210ENST00000493682 C19orf73Q9NVV2 129 aa13.33□□□□□ -0.28
COL9A1-210ENST00000493682 STUB1Q9UNE7 303 aa13.33□□□□□ -0.28
COL9A1-210ENST00000493682 ITGB1BP1O14713 200 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 MYL12BO14950 172 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 HSPA12AO43301 675 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 CA2P00918 260 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 IGLV1-51P01701 117 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 TRGV3P03979 118 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 TFAP2AP05549 437 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 CD40LGP29965 261 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 UNC119Q13432 240 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 C1orf100Q5SVJ3 147 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 LAIR2Q6ISS4 152 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 MOB1BQ7L9L4 216 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 LRRTM1Q86UE6 522 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 DRAXINQ8NBI3 349 aaPredicted RBP13.32□□□□□ -0.28
COL9A1-210ENST00000493682 RSRP1Q9BUV0 290 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 TM2D1Q9BX74 207 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 C11orf54Q9H0W9 315 aaPredicted RBP13.32□□□□□ -0.28
COL9A1-210ENST00000493682 KCNK15Q9H427 330 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 EDA2RQ9HAV5 297 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 OR1A1Q9P1Q5 309 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 PSORS1C1Q9UIG5 152 aa13.32□□□□□ -0.28
COL9A1-210ENST00000493682 A8MZ25 164 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 SLC22A1O15245 554 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 PROP1O75360 226 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 IGKV1-16P04430 117 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 QRFPP83859 136 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 ACSM3Q53FZ2 586 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 GLT8D1Q68CQ7 371 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 AHSA2Q719I0 299 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 ANKRD13BQ86YJ7 626 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 SGPP2Q8IWX5 399 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 DHRSXQ8N5I4 330 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 KCNG3Q8TAE7 436 aa13.31□□□□□ -0.28
COL9A1-210ENST00000493682 TRBV6-6A0A0A6YYG2 114 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 CPEP16870 476 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 CEACAM6P40199 344 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 LINC00205P59089 165 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 NANOGP1Q8N7R0 232 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 GRPEL2Q8TAA5 225 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 EDARADDQ8WWZ3 215 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 PHYHIPQ92561 330 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 ISOC1Q96CN7 298 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 TSNAXQ99598 290 aaKnown RBP13.3□□□□□ -0.28
COL9A1-210ENST00000493682 HDHD3Q9BSH5 251 aaPredicted RBP13.3□□□□□ -0.28
COL9A1-210ENST00000493682 RIMS4Q9H426 269 aaPredicted RBP13.3□□□□□ -0.28
COL9A1-210ENST00000493682 RANGRFQ9HD47 186 aaPredicted RBP13.3□□□□□ -0.28
COL9A1-210ENST00000493682 ZNF355PQ9NSJ1 428 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 PLEKHJ1Q9NW61 149 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 AK3Q9UIJ7 227 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 SACSQ9NZJ4 4579 aa13.3□□□□□ -0.28
COL9A1-210ENST00000493682 A0A0A6YYD4 124 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 TMEM14DPA8MWL7 114 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 SPDEFO95238 335 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 GNAO1P09471 354 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 ZP3P21754 424 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 ZBTB25P24278 435 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 FXYD3Q14802 87 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 RBM48Q5RL73 367 aaKnown RBP13.29□□□□□ -0.28
COL9A1-210ENST00000493682 MS4A15Q8N5U1 240 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 ZNF383Q8NA42 475 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 PTX4Q96A99 478 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 LYSTQ99698 3801 aa13.29□□□□□ -0.28
COL9A1-210ENST00000493682 CSMD3Q7Z407 3707 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 C13orf42A0A1B0GVH6 325 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 SOCS1O15524 211 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 SLC25A17O43808 307 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 SCTP09683 121 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 CD37P11049 281 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 ARSBP15848 533 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 RPS16P62249 146 aaKnown RBP13.28□□□□□ -0.28
COL9A1-210ENST00000493682 HLA-DRB3P79483 266 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 KLF5Q13887 457 aaPredicted RBP13.28□□□□□ -0.28
COL9A1-210ENST00000493682 PACRGLQ8N7B6 248 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 POC5Q8NA72 575 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 OR5T1Q8NG75 326 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 TMED9Q9BVK6 235 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 LPAR5Q9H1C0 372 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 PLCXD1Q9NUJ7 323 aa13.28□□□□□ -0.28
COL9A1-210ENST00000493682 EPPK1P58107 5090 aaKnown RBP13.27□□□□□ -0.29
COL9A1-210ENST00000493682 A0A0G2JLM5 398 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 ANKRD34BA5PLL1 514 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 H3BUA1 57 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 BPNT1O95861 308 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 SRMP19623 302 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 VEGFCP49767 419 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 SSBP2P81877 361 aaPredicted RBP13.27□□□□□ -0.29
COL9A1-210ENST00000493682 IL34Q6ZMJ4 242 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 PDPNQ86YL7 162 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 C8orf59Q8N0T1 100 aaPredicted RBP13.27□□□□□ -0.29
COL9A1-210ENST00000493682 BPIFB6Q8NFQ5 453 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 FBLIM1Q8WUP2 373 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 Q9N2K0 584 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 C8orf4Q9NR00 106 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 FKBP14Q9NWM8 211 aa13.27□□□□□ -0.29
COL9A1-210ENST00000493682 ZNF221Q9UK13 617 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms