RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 NEGR1Q7Z3B1 354 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 BPIFA4PQ86YQ2 179 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 SFTPA1Q8IWL2 248 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 SCCPDHQ8NBX0 429 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 SLC16A11Q8NCK7 471 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 NXT1Q9UKK6 140 aaKnown RBP5.88□□□□□ -1.47
VPS13B-205ENST00000493587 BOKQ9UMX3 212 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-205ENST00000493587 KBTBD11-OT1A0A1B0GTJ5 212 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 hDV102S1A0JD36 115 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 HS3ST1O14792 307 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 SRIP30626 198 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 GPR183P32249 361 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 PRICKLE4Q2TBC4 344 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 VAX1Q5SQQ9 334 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF324BQ6AW86 544 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-205ENST00000493587 RNASEKQ6P5S7 137 aaKnown RBP5.88□□□□□ -1.47
VPS13B-205ENST00000493587 KCTD18Q6PI47 426 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-205ENST00000493587 HAPLN4Q86UW8 402 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 TMEM171Q8WVE6 324 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 NEUROG1Q92886 237 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 NEIL1Q96FI4 390 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-205ENST00000493587 KLHDC7BQ96G42 594 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF764Q96H86 408 aaPredicted RBP5.88□□□□□ -1.47
VPS13B-205ENST00000493587 PRSS27Q9BQR3 290 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 STRADBQ9C0K7 418 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 SLC25A22Q9H936 323 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 MED29Q9NX70 200 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 A0A0C4DFX4 3053 aa5.88□□□□□ -1.47
VPS13B-205ENST00000493587 VCANP13611 3396 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 H0Y980 276 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 BMPR1BO00238 502 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 F2RL2O00254 374 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF217O75362 1048 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 CSRP1P21291 193 aaKnown RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 UBE2G1P62253 170 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 POU3F1Q03052 451 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 ITPRIPL2Q3MIP1 535 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 LILRA3Q8N6C8 439 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 Q8N976 141 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 BAHD1Q8TBE0 780 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 GMPPAQ96IJ6 420 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 UBE2J1Q9Y385 318 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 HEATR1Q9H583 2144 aaKnown RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 SPENQ96T58 3664 aaKnown RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 KIF26BQ2KJY2 2108 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 TDRD6O60522 2096 aaKnown RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 hCG_38984A0A1B0GV85 526 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 FEZF1A0PJY2 475 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF732B4DXR9 585 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 J3QR06 171 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 SOCS1O15524 211 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 C1QTNF9P0C862 333 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 GNG4P50150 75 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 LINC00310P59036 64 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 SLC35B1P78383 322 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 SSBP2P81877 361 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 ROM1Q03395 351 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 GGTLC2Q14390 218 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 ABHD17CQ6PCB6 329 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 VSTM2AQ8TAG5 236 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF480Q8WV37 535 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 CLDN23Q96B33 292 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 ULBP2Q9BZM5 246 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 VSIRQ9H7M9 311 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 WDR76Q9H967 626 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 DYSFO75923 2080 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 PHF3Q92576 2039 aaKnown RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 A0A1W2PS18 150 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 PSMB11A5LHX3 300 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 PAGE4O60829 102 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 CER1O95813 267 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 CRYAAP02489 173 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 CA3P07451 260 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 MDH2P40926 338 aaKnown RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 CTXN1P60606 82 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 GNG3P63215 75 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 SRSF6Q13247 344 aaKnown RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 RPEL1Q2QD12 228 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 C2orf27AQ580R0 203 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 CXorf66Q5JRM2 361 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 TRAT1Q6PIZ9 186 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF695Q8IW36 515 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 OR8B3Q8NGG8 313 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 OR10G8Q8NGN5 311 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 ZNF418Q8TF45 676 aaPredicted RBP5.87□□□□□ -1.47
VPS13B-205ENST00000493587 IRF7Q92985 503 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 ARHGAP5-AS1Q96IT6 56 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 TPPP3Q9BW30 176 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 TMEM59Q9BXS4 323 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 MS4A5Q9H3V2 200 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 PELI2Q9HAT8 420 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 CYSLTR1Q9Y271 337 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 SPEGQ15772 3267 aa5.87□□□□□ -1.47
VPS13B-205ENST00000493587 PRRC2BQ5JSZ5 2229 aaKnown RBP5.86□□□□□ -1.47
VPS13B-205ENST00000493587 C9orf118A6NHY6 69 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 C1QTNF9BB2RNN3 333 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 RENP00797 406 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 VSIG8P0DPA2 414 aa5.86□□□□□ -1.47
VPS13B-205ENST00000493587 CD226Q15762 336 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms