RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 LGALS12Q96DT0 336 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 SPACA5Q96QH8 159 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 ZNF649Q9BS31 505 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 ALG8Q9BVK2 526 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 SLC5A7Q9GZV3 580 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 PPIL3Q9H2H8 161 aaKnown RBP7.21□□□□□ -1.26
HDAC3-212ENST00000492407 RAB9BQ9NP90 201 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 NIT2Q9NQR4 276 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 LIN7CQ9NUP9 197 aaKnown RBP7.21□□□□□ -1.26
HDAC3-212ENST00000492407 MRPS18AQ9NVS2 196 aaKnown RBP7.21□□□□□ -1.26
HDAC3-212ENST00000492407 FAM118AQ9NWS6 357 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 PAK1IP1Q9NWT1 392 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-212ENST00000492407 KIF25Q9UIL4 384 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 ELF5Q9UKW6 265 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-212ENST00000492407 SIRT4Q9Y6E7 314 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-212ENST00000492407 COL7A1Q02388 2944 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 NBEAL2Q6ZNJ1 2754 aa7.21□□□□□ -1.26
HDAC3-212ENST00000492407 TRAV34A0A0B4J273 112 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 SULT1C2O00338 296 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 CCSO14618 274 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 ORC5O43913 435 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 CD2P06729 351 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 ELANEP08246 267 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 GABRB1P18505 474 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 IL3RAP26951 378 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 MC5RP33032 325 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 GLP1RP43220 463 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 CDX1P47902 265 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-212ENST00000492407 BLOC1S1P78537 153 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 HES1Q14469 280 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 KIR2DS1Q14954 304 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 RSU1Q15404 277 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 RNF144BQ7Z419 303 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 ZNF329Q86UD4 541 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 Q8N6K4 173 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 ZBTB34Q8NCN2 500 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 OR10X1Q8NGY0 326 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 OR2T10Q8NGZ9 312 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 OR8U1Q8NH10 309 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 RHOXF1Q8NHV9 184 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 ZFAND1Q8TCF1 268 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 SFT2D1Q8WV19 159 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 SNAPC3Q92966 411 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 C14orf144Q96I85 54 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 DPCDQ9BVM2 203 aaPredicted RBP7.2□□□□□ -1.26
HDAC3-212ENST00000492407 ABCG5Q9H222 651 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 MED9Q9NWA0 146 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 ERVK13-1Q9NX77 482 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 MGAT4CQ9UBM8 478 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 MLXQ9UH92 298 aa7.2□□□□□ -1.26
HDAC3-212ENST00000492407 RPL36Q9Y3U8 105 aaKnown RBP7.2□□□□□ -1.26
HDAC3-212ENST00000492407 ELOA3CA0A087WX78 387 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-212ENST00000492407 IGHV1-3A0A0C4DH29 117 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 TMEM30CPA0ZSE6 113 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 SH2D7A6NKC9 451 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-212ENST00000492407 SAC3D1A6NKF1 404 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 TRDCB7Z8K6 153 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 GABRPO00591 440 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 HSD17B6O14756 317 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 PTTG1O95997 202 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 IGKV1D-33P01593 117 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 IGKV1-33P01594 117 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 HOXD3P31249 432 aaPredicted RBP7.19□□□□□ -1.26
HDAC3-212ENST00000492407 GPR12P47775 334 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 FOXE3Q13461 319 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 MPV17LQ2QL34 196 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 RNASE10Q5GAN6 216 aaKnown RBP7.19□□□□□ -1.26
HDAC3-212ENST00000492407 RPL22L1Q6P5R6 122 aaKnown RBP7.19□□□□□ -1.26
HDAC3-212ENST00000492407 C8orf86Q6ZUL3 223 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 SUMF2Q8NBJ7 301 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 KLHL30-AS1Q8NEE0 82 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 OR6F1Q8NGZ6 308 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 OR4K15Q8NH41 348 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 SETD6Q8TBK2 473 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 GPR148Q8TDV2 347 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 TNFAIP8L1Q8WVP5 186 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 GPER1Q99527 375 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 MIXL1Q9H2W2 232 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 TMEM138Q9NPI0 162 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 ST3GAL6Q9Y274 331 aa7.19□□□□□ -1.26
HDAC3-212ENST00000492407 RYR3Q15413 4870 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 I3L521 148 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 CCL24O00175 119 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 EI24O14681 340 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 RGS5O15539 181 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 CA11O75493 328 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 MOSP00540 346 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 IGF1P05019 195 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 OR5H8P0DN80 308 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 NQO2P16083 231 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 INSL3P51460 131 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 ZNF137PP52743 207 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 TNFRSF9Q07011 255 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 GUK1Q16774 197 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 C5orf64Q2M2E5 130 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 CXorf66Q5JRM2 361 aaPredicted RBP7.18□□□□□ -1.26
HDAC3-212ENST00000492407 UTF1Q5T230 341 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 C9orf66Q5T8R8 295 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 LPCAT4Q643R3 524 aa7.18□□□□□ -1.26
HDAC3-212ENST00000492407 C11orf87Q6NUJ2 197 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms