RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 NIPBLQ6KC79 2804 aaeCLIP7.84□□□□□ -1.15
BRCA1-219ENST00000491747 hCG_1809904A0A1W2PP81 198 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 A0A1W2PR64 198 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 A0A1W2PRV1 198 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 OR5AC1P0C628 307 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 ZNF728P0DKX0 622 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 ZNF16P17020 682 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-219ENST00000491747 HOXB4P17483 251 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-219ENST00000491747 DTYMKP23919 212 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 DUSP1P28562 367 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 OR2B8PP59922 312 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 LMO4P61968 165 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 HOXA4Q00056 320 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-219ENST00000491747 LRTM2Q8N967 370 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 ZNF565Q8N9K5 539 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 TOMM40LQ969M1 308 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 Q96M66 194 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 TMPRSS5Q9H3S3 457 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 UNKLQ9H9P5 680 aaKnown RBP7.84□□□□□ -1.15
BRCA1-219ENST00000491747 HSF4Q9ULV5 492 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 PIGLQ9Y2B2 252 aa7.84□□□□□ -1.15
BRCA1-219ENST00000491747 FN1P02751 2386 aaKnown RBP7.84□□□□□ -1.16
BRCA1-219ENST00000491747 TLN2Q9Y4G6 2542 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 A0A1B0GW64 132 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 ST8SIA3O43173 380 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 DIRAS3O95661 229 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 OR8U8P0C7N1 319 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 NQO2P16083 231 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 TNFSF4P23510 183 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 CHATP28329 748 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 TMEM187Q14656 261 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 PRAMEF6Q5VXH4 476 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 CYB5R2Q6BCY4 276 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 C1QL4Q86Z23 238 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 HDHD3Q9BSH5 251 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-219ENST00000491747 YAE1D1Q9NRH1 226 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 TMEM106BQ9NUM4 274 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 FBXO7Q9Y3I1 522 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 ZFHX3Q15911 3703 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 SETD2Q9BYW2 2564 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-219ENST00000491747 TXNL1O43396 289 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 ARG1P05089 322 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 TNFRSF1AP19438 455 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 FHITP49789 147 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 MTCP1P56278 107 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 ZNF266Q14584 549 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 CLINT1Q14677 625 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 GNMTQ14749 295 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 OR8G1Q15617 311 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 SP6Q3SY56 376 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 SOHLH1Q5JUK2 328 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 LIAT1Q6ZQX7 453 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 Q6ZSR3 168 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 MOGAT3Q86VF5 341 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 LGI3Q8N145 548 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 SPSB1Q96BD6 273 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 C1orf159Q96HA4 380 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 METTL9Q9H1A3 318 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 SLC2A9Q9NRM0 540 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 PPP1R3CQ9UQK1 317 aa7.83□□□□□ -1.16
BRCA1-219ENST00000491747 A0A1W2PPE2 198 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 CLN5O75503 358 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 CYB5R3P00387 301 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-219ENST00000491747 IGHV2-70P01814 119 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 MAS1LP35410 378 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 CD200P41217 278 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 RAB2AP61019 212 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 RSU1Q15404 277 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 OR8B8Q15620 311 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 FAM201AQ5SY85 155 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 LYZL2Q7Z4W2 148 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 SUMF2Q8NBJ7 301 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 HSD17B11Q8NBQ5 300 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 FAAP24Q9BTP7 215 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 OPA3Q9H6K4 179 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 WFDC1Q9HC57 220 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 TMED3Q9Y3Q3 217 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 SVEP1Q4LDE5 3571 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 TMEM178BH3BS89 294 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 WRBO00258 174 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 ZNF205O95201 554 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 OR2C1O95371 312 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 OR13C7P0DN81 318 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 LMO1P25800 156 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 FXYD4P59646 89 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 TAF9Q16594 264 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 IGSF11Q5DX21 431 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 WDR86Q86TI4 376 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 CCDC71LQ8N9Z2 235 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 FAM213BQ8TBF2 198 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 BSCL2Q96G97 398 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-219ENST00000491747 RSRP1Q9BUV0 290 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 FGF23Q9GZV9 251 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-219ENST00000491747 SH3BGRL3Q9H299 93 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 UFSP2Q9NUQ7 469 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 AK3Q9UIJ7 227 aa7.82□□□□□ -1.16
BRCA1-219ENST00000491747 ARHGAP32A7KAX9 2087 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 K7N7A8 449 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 TGFAP01135 160 aa7.81□□□□□ -1.16
BRCA1-219ENST00000491747 GATA4P43694 442 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms