RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 Q56UQ5 140 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 CYP2G1PQ6ZSU1 146 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 OR8I2Q8N0Y5 310 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 OR4D5Q8NGN0 318 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 HSD17B10Q99714 261 aaKnown RBP10.98□□□□□ -0.65
SHOX2-205ENST00000490689 SRXN1Q9BYN0 137 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 UCP1P25874 307 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 SRD5A2P31213 254 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 PSG5Q15238 335 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 TMPRSS7Q7RTY8 843 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 WDFY1Q8IWB7 410 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 ST6GALNAC3Q8NDV1 305 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 OR52L2PQ8NGH6 319 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 LIME1Q9H400 295 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 PLA2G2EQ9NZK7 142 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 CADP27708 2225 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 GDF9O60383 454 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 NUBP1P53384 320 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 ZNF576Q9H609 170 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 BET1LQ9NYM9 111 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 SLC17A3O00476 420 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 TNFRSF9Q07011 255 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 FAM131CQ96AQ9 280 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 R3HDM4Q96D70 268 aa10.98□□□□□ -0.65
SHOX2-205ENST00000490689 PLXNA2O75051 1894 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 KIAA1671Q9BY89 1806 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 PRR19A6NJB7 356 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 CD82P27701 267 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 FXYD3Q14802 87 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 SLC25A45Q8N413 288 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 C1orf147Q96MC9 270 aaPredicted RBP10.97□□□□□ -0.65
SHOX2-205ENST00000490689 MRPL18Q9H0U6 180 aaKnown RBP10.97□□□□□ -0.65
SHOX2-205ENST00000490689 WNT5BQ9H1J7 359 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 FOXJ2Q9P0K8 574 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 IGKV1-27A0A075B6S5 117 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 EREGO14944 169 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 ENSAO43768 121 aaKnown RBP10.97□□□□□ -0.65
SHOX2-205ENST00000490689 PDE6DO43924 150 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 IGFBP7Q16270 282 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 MIC13Q5XKP0 118 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 SPSB3Q6PJ21 355 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 DLL3Q9NYJ7 618 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 PI4KAP42356 2102 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 EPOPA6NHQ4 379 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 CEACAM1P13688 526 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 SELEP16581 610 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 CD1BP29016 333 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 RHOBP62745 196 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 TRAT1Q6PIZ9 186 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 MOB1BQ7L9L4 216 aa10.97□□□□□ -0.65
SHOX2-205ENST00000490689 SF3B5Q9BWJ5 86 aaKnown RBP10.97□□□□□ -0.65
SHOX2-205ENST00000490689 OR5B21A6NL26 309 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 TNFSF10P50591 281 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 ID3Q02535 119 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 OR5A2Q8NGI9 324 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 OR1L1Q8NH94 360 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 PLCE1Q9P212 2302 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 DENND4AQ7Z401 1863 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 LYZL6O75951 148 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 GZMBP10144 247 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 SRFP11831 508 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 SRP14P37108 136 aaKnown RBP10.96□□□□□ -0.65
SHOX2-205ENST00000490689 ATP5G3P48201 142 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 TFF3Q07654 80 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 CEACAM21Q3KPI0 293 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 SPATA45Q537H7 98 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 ERASQ7Z444 233 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 ZNF525Q8N782 197 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 C22orf15Q8WYQ4 148 aa10.96□□□□□ -0.65
SHOX2-205ENST00000490689 COL4A3Q01955 1670 aa10.96□□□□□ -0.66
SHOX2-205ENST00000490689 STUMQ69YW2 141 aa10.96□□□□□ -0.66
SHOX2-205ENST00000490689 UNQ6494/PRO21346Q6UXR6 183 aa10.96□□□□□ -0.66
SHOX2-205ENST00000490689 OR8G5Q8NG78 346 aa10.96□□□□□ -0.66
SHOX2-205ENST00000490689 WNT10AQ9GZT5 417 aa10.96□□□□□ -0.66
SHOX2-205ENST00000490689 SPTAN1Q13813 2472 aaKnown RBP10.96□□□□□ -0.66
SHOX2-205ENST00000490689 M0R2Z0 102 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 LAMTOR5O43504 91 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 C1QTNF9P0C862 333 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 TAS2R45P59539 299 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 TECRQ9NZ01 308 aaKnown RBP10.95□□□□□ -0.66
SHOX2-205ENST00000490689 IGHV5-10-1A0A0J9YXX1 117 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 HELTA6NFD8 242 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 CSN3P07498 182 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 EGLN1Q9GZT9 426 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 RIF1Q5UIP0 2472 aaKnown RBP10.95□□□□□ -0.66
SHOX2-205ENST00000490689 A0A1B0GUS0 222 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 CHEK1O14757 476 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 NAPSAO96009 420 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 CFPP27918 469 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 GNG10P50151 68 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 ZNF826PQ6ZT77 177 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 TMEM256Q8N2U0 113 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 OR5R1Q8NH85 324 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 TRIB1Q96RU8 372 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 OR6C3Q9NZP0 311 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 MPC1Q9Y5U8 109 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 NCOA6Q14686 2063 aaPredicted RBP10.95□□□□□ -0.66
SHOX2-205ENST00000490689 TMEM250H0YL14 139 aa10.95□□□□□ -0.66
SHOX2-205ENST00000490689 S1PR2O95136 353 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms