RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 PSG5Q15238 335 aa12.16□□□□□ -0.46
PLOD3-216ENST00000489927 ZNF880Q6PDB4 577 aa12.16□□□□□ -0.46
PLOD3-216ENST00000489927 ZNF562Q6V9R5 426 aa12.16□□□□□ -0.46
PLOD3-216ENST00000489927 ANKRD13BQ86YJ7 626 aa12.16□□□□□ -0.46
PLOD3-216ENST00000489927 SETD6Q8TBK2 473 aa12.16□□□□□ -0.46
PLOD3-216ENST00000489927 CYGBQ8WWM9 190 aa12.16□□□□□ -0.46
PLOD3-216ENST00000489927 RNF5Q99942 180 aa12.16□□□□□ -0.46
PLOD3-216ENST00000489927 NICN1Q9BSH3 213 aa12.16□□□□□ -0.46
PLOD3-216ENST00000489927 CHMP1AQ9HD42 196 aaPredicted RBP12.16□□□□□ -0.46
PLOD3-216ENST00000489927 EFCAB10A6NFE3 127 aa12.15□□□□□ -0.46
PLOD3-216ENST00000489927 CD1AP06126 327 aa12.15□□□□□ -0.46
PLOD3-216ENST00000489927 MAPK3P27361 379 aaPredicted RBP12.15□□□□□ -0.46
PLOD3-216ENST00000489927 ADAMTSL5Q6ZMM2 481 aa12.15□□□□□ -0.46
PLOD3-216ENST00000489927 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
PLOD3-216ENST00000489927 DRAXINQ8NBI3 349 aaPredicted RBP12.15□□□□□ -0.46
PLOD3-216ENST00000489927 THRSPQ92748 146 aa12.15□□□□□ -0.46
PLOD3-216ENST00000489927 TMEM59Q9BXS4 323 aa12.15□□□□□ -0.46
PLOD3-216ENST00000489927 KCNK15Q9H427 330 aa12.15□□□□□ -0.46
PLOD3-216ENST00000489927 OR1A1Q9P1Q5 309 aa12.15□□□□□ -0.46
PLOD3-216ENST00000489927 ITGB1BP1O14713 200 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 SLC22A1O15245 554 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 PROP1O75360 226 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 ARSBP15848 533 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 CEACAM6P40199 344 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 WNT4P56705 351 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 LINC00205P59089 165 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 UNC119Q13432 240 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 TTC23Q5W5X9 447 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 LRRTM1Q86UE6 522 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 SETD9Q8NE22 299 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 GRPEL2Q8TAA5 225 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 TM2D1Q9BX74 207 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 C11orf54Q9H0W9 315 aaPredicted RBP12.14□□□□□ -0.47
PLOD3-216ENST00000489927 RANGRFQ9HD47 186 aaPredicted RBP12.14□□□□□ -0.47
PLOD3-216ENST00000489927 ZNF355PQ9NSJ1 428 aa12.14□□□□□ -0.47
PLOD3-216ENST00000489927 A0A0A6YYD4 124 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 MYL12BO14950 172 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 CPEP16870 476 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 VEGFCP49767 419 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 FXYD3Q14802 87 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 C1orf100Q5SVJ3 147 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 LAIR2Q6ISS4 152 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 MOB1BQ7L9L4 216 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 POC5Q8NA72 575 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 KCNG3Q8TAE7 436 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 TSNAXQ99598 290 aaKnown RBP12.13□□□□□ -0.47
PLOD3-216ENST00000489927 SPATA25Q9BR10 227 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 HDHD3Q9BSH5 251 aaPredicted RBP12.13□□□□□ -0.47
PLOD3-216ENST00000489927 PLEKHJ1Q9NW61 149 aa12.13□□□□□ -0.47
PLOD3-216ENST00000489927 C13orf42A0A1B0GVH6 325 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 SPDEFO95238 335 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 ZP3P21754 424 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 ZBTB25P24278 435 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 RPS16P62249 146 aaKnown RBP12.12□□□□□ -0.47
PLOD3-216ENST00000489927 SSBP2P81877 361 aaPredicted RBP12.12□□□□□ -0.47
PLOD3-216ENST00000489927 QRFPP83859 136 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 KLF5Q13887 457 aaPredicted RBP12.12□□□□□ -0.47
PLOD3-216ENST00000489927 HAGHQ16775 308 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 ACSM3Q53FZ2 586 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 RBM48Q5RL73 367 aaKnown RBP12.12□□□□□ -0.47
PLOD3-216ENST00000489927 GLT8D1Q68CQ7 371 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 IL34Q6ZMJ4 242 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 AHSA2Q719I0 299 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 ZNF383Q8NA42 475 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 OR5T1Q8NG75 326 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 EDARADDQ8WWZ3 215 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 RIMS4Q9H426 269 aaPredicted RBP12.12□□□□□ -0.47
PLOD3-216ENST00000489927 AK3Q9UIJ7 227 aa12.12□□□□□ -0.47
PLOD3-216ENST00000489927 TRBV6-6A0A0A6YYG2 114 aa12.11□□□□□ -0.47
PLOD3-216ENST00000489927 ANKRD34BA5PLL1 514 aa12.11□□□□□ -0.47
PLOD3-216ENST00000489927 TMEM14DPA8MWL7 114 aa12.11□□□□□ -0.47
PLOD3-216ENST00000489927 SLC25A17O43808 307 aa12.11□□□□□ -0.47
PLOD3-216ENST00000489927 HLA-DRB3P79483 266 aa12.11□□□□□ -0.47
PLOD3-216ENST00000489927 NANOGP1Q8N7R0 232 aa12.11□□□□□ -0.47
PLOD3-216ENST00000489927 OR9G4Q8NGQ1 327 aa12.11□□□□□ -0.47
PLOD3-216ENST00000489927 PHYHIPQ92561 330 aa12.11□□□□□ -0.47
PLOD3-216ENST00000489927 PTX4Q96A99 478 aa12.11□□□□□ -0.47
PLOD3-216ENST00000489927 PSORS1C1Q9UIG5 152 aa12.11□□□□□ -0.47
PLOD3-216ENST00000489927 A0A0G2JLM5 398 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 H3BUA1 57 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 SOCS1O15524 211 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 GNAO1P09471 354 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 SCTP09683 121 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 SYNJ2BPP57105 145 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 PJVKQ0ZLH3 352 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 PDPNQ86YL7 162 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 DHRSXQ8N5I4 330 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 THAP7Q9BT49 309 aaPredicted RBP12.1□□□□□ -0.47
PLOD3-216ENST00000489927 TMED9Q9BVK6 235 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 LPAR5Q9H1C0 372 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 ZNF221Q9UK13 617 aa12.1□□□□□ -0.47
PLOD3-216ENST00000489927 PLECQ15149 4684 aaKnown RBP12.1□□□□□ -0.47
PLOD3-216ENST00000489927 H0Y980 276 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 CNIH1O95406 144 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 BPNT1O95861 308 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 APOA2P02652 100 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 CD37P11049 281 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 SRMP19623 302 aa12.09□□□□□ -0.47
PLOD3-216ENST00000489927 DEFA5Q01523 94 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms