RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ZNF66Q6ZN08 573 aa13.01□□□□□ -0.33
CLDN11-208ENST00000488989 C1orf229Q6ZS94 237 aaPredicted RBP13.01□□□□□ -0.33
CLDN11-208ENST00000488989 TMED4Q7Z7H5 227 aa13.01□□□□□ -0.33
CLDN11-208ENST00000488989 OR10X1Q8NGY0 326 aa13.01□□□□□ -0.33
CLDN11-208ENST00000488989 AMMECR1Q9Y4X0 333 aaPredicted RBP13.01□□□□□ -0.33
CLDN11-208ENST00000488989 CSPG4Q6UVK1 2322 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 A0A0B4J293 547 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 CENPVL3A0A0U1RRI6 287 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 C7orf66A4D0T2 115 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 MPPED1O15442 326 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 AVPP01185 164 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 ARG1P05089 322 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 OR4E1P0C645 316 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 S100GP29377 79 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 SUPT4H1P63272 117 aaKnown RBP13□□□□□ -0.33
CLDN11-208ENST00000488989 MINOS1Q5TGZ0 78 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 GLDNQ6ZMI3 551 aaPredicted RBP13□□□□□ -0.33
CLDN11-208ENST00000488989 KCTD9Q7L273 389 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 CAPSLQ8WWF8 208 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 RTN4IP1Q8WWV3 396 aaPredicted RBP13□□□□□ -0.33
CLDN11-208ENST00000488989 LHX4Q969G2 390 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 GALNT14Q96FL9 552 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 S1PR3Q99500 378 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 NAA60Q9H7X0 242 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 TBL2Q9Y4P3 447 aaKnown RBP13□□□□□ -0.33
CLDN11-208ENST00000488989 MINOS1-NBL1R4GNA1 71 aa13□□□□□ -0.33
CLDN11-208ENST00000488989 TEX15Q9BXT5 2789 aa12.99□□□□□ -0.33
CLDN11-208ENST00000488989 SMAD7O15105 426 aaKnown RBP12.99□□□□□ -0.33
CLDN11-208ENST00000488989 HTR1DP28221 377 aa12.99□□□□□ -0.33
CLDN11-208ENST00000488989 DUTP33316 252 aaKnown RBP12.99□□□□□ -0.33
CLDN11-208ENST00000488989 RAB25P57735 213 aa12.99□□□□□ -0.33
CLDN11-208ENST00000488989 PPP1R1AQ13522 171 aa12.99□□□□□ -0.33
CLDN11-208ENST00000488989 MIDNQ504T8 468 aa12.99□□□□□ -0.33
CLDN11-208ENST00000488989 RPL39P5Q59GN2 51 aa12.99□□□□□ -0.33
CLDN11-208ENST00000488989 LDLRAD2Q5SZI1 272 aa12.99□□□□□ -0.33
CLDN11-208ENST00000488989 TBC1D26Q86UD7 250 aa12.99□□□□□ -0.33
CLDN11-208ENST00000488989 HSD17B10Q99714 261 aaKnown RBP12.99□□□□□ -0.33
CLDN11-208ENST00000488989 DPM3Q9P2X0 92 aa12.99□□□□□ -0.33
CLDN11-208ENST00000488989 C9orf170A2RU37 121 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 CD5LO43866 347 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 B3GALNT1O75752 331 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 SFT2D2O95562 160 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 AKR1C4P17516 323 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 F2RP25116 425 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 RPL30P62888 115 aaKnown RBP12.98□□□□□ -0.33
CLDN11-208ENST00000488989 ZNF816Q0VGE8 651 aaPredicted RBP12.98□□□□□ -0.33
CLDN11-208ENST00000488989 TATDN3Q17R31 274 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 LYG2Q86SG7 212 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 SGPP2Q8IWX5 399 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 TCTEX1D1Q8N7M0 179 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 ADTRPQ96IZ2 230 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 BEX2Q9BXY8 128 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 BEX1Q9HBH7 125 aa12.98□□□□□ -0.33
CLDN11-208ENST00000488989 FAM212BQ9NTI7 297 aaPredicted RBP12.98□□□□□ -0.33
CLDN11-208ENST00000488989 TRAV40A0A0B4J280 105 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 IGHV1-69DA0A0B4J2H0 117 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 LINC00473A8K010 186 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 RNF212BA8MTL3 300 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 SNRPGP15A8MWD9 76 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 LEUTXA8MZ59 168 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 OOSP1A8MZH6 123 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 M0R1X1 148 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 TXNL1O43396 289 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 TNFSF12O43508 249 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 FSHBP01225 129 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 IGHV1-69P01742 117 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 CT45A6P0DMU7 189 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 CT45A5P0DMU8 189 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 CT45A7P0DMV0 189 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 THBS3P49746 956 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 CATR1Q13166 79 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 DHRS2Q13268 280 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 KLF17Q5JT82 389 aaPredicted RBP12.97□□□□□ -0.33
CLDN11-208ENST00000488989 TPTE2P1Q5T6R2 138 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 C11orf88Q6PI97 169 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 DDB2Q92466 427 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 AJUBAQ96IF1 538 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 C18orf12Q96KH6 178 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 GPHA2Q96T91 129 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 SEC22CQ9BRL7 303 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 KCNIP3Q9Y2W7 256 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 OTOGQ6ZRI0 2925 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 ACANP16112 2415 aa12.97□□□□□ -0.33
CLDN11-208ENST00000488989 TEX13DA0A0J9YY54 714 aaPredicted RBP12.96□□□□□ -0.33
CLDN11-208ENST00000488989 C3orf85A0A1B0GTC6 90 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 H0Y980 276 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 NPFFO15130 113 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 GAPDHP04406 335 aaKnown RBP12.96□□□□□ -0.33
CLDN11-208ENST00000488989 UCP1P25874 307 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 CEACAM3P40198 252 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 BPIFB3P59826 476 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 DIAPH2-AS1Q14236 149 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 TMEM187Q14656 261 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 C4orf46Q504U0 113 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 GPR157Q5UAW9 335 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 LHFPL4Q7Z7J7 247 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 TGIF2LXQ8IUE1 241 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 PDZD9Q8IXQ8 264 aa12.96□□□□□ -0.33
CLDN11-208ENST00000488989 ZNF431Q8TF32 576 aaPredicted RBP12.96□□□□□ -0.33
CLDN11-208ENST00000488989 NABP2Q9BQ15 211 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms