RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 MOB4Q9Y3A3 225 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 FIS1Q9Y3D6 152 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 CEP170Q5SW79 1584 aa2.34□□□□□ -2.03
PRPF4-203ENST00000488937 DHX57Q6P158 1386 aaKnown RBP2.34□□□□□ -2.04
PRPF4-203ENST00000488937 ROBO3Q96MS0 1386 aa2.34□□□□□ -2.04
PRPF4-203ENST00000488937 SSH2Q76I76 1423 aa2.34□□□□□ -2.04
PRPF4-203ENST00000488937 UBR2Q8IWV8 1755 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 CACNA1SQ13698 1873 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 NLRC5Q86WI3 1866 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 OTOFQ9HC10 1997 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 IGLV11-55A0A075B6I3 123 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 IGHV1-45A0A0A0MS14 117 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 TRAPPC13A5PLN9 417 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 SIGLEC16A6NMB1 481 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 OR4C45A6NMZ5 311 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 C4orf51C9J302 202 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 H0YJW9 148 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 BPY2O14599 106 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 MRASO14807 208 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 ZNF207O43670 478 aaKnown RBP2.33□□□□□ -2.04
PRPF4-203ENST00000488937 POP7O75817 140 aaKnown RBP2.33□□□□□ -2.04
PRPF4-203ENST00000488937 SERPINE1P05121 402 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 ADRB3P13945 408 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 SPI1P17947 270 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 CDK2P24941 298 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 TIMM10P62072 90 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 HERVK_113P63121 156 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 BTN1A1Q13410 526 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 TMEM128Q5BJH2 165 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 EBLN2Q6P2I7 272 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 UNQ9165/PRO28630Q6UXU0 137 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 NTM-AS1Q6ZSK4 140 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 FA2HQ7L5A8 372 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 LRP11Q86VZ4 500 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 Q8N7P7 452 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 ZDHHC22Q8N966 263 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 OR4K5Q8NGD3 323 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 CT55Q8WUE5 264 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 GALMQ96C23 342 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 STARD4Q96DR4 205 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 TCEAL4Q96EI5 215 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 REEP6Q96HR9 211 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 DNAJC30Q96LL9 226 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 TSPAN32Q96QS1 320 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 OR2A5Q96R48 311 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 TMEM222Q9H0R3 208 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 NOX3Q9HBY0 568 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 SPANXA1Q9NS26 97 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 CISHQ9NSE2 258 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 LYRM2Q9NU23 88 aaPredicted RBP2.33□□□□□ -2.04
PRPF4-203ENST00000488937 TAC3Q9UHF0 121 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 ZNF225Q9UK10 706 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 ANAPC10Q9UM13 185 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 NUBP2Q9Y5Y2 271 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 PXMP4Q9Y6I8 212 aa2.33□□□□□ -2.04
PRPF4-203ENST00000488937 IGHV3-64DA0A0J9YX35 117 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 KLF18A0A0U1RQI7 1052 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 C5orf63A6NC05 138 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 MAP1LC3B2A6NCE7 125 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 KNCNA6PVL3 124 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 M0R381 172 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 CHST10O43529 356 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 EIF1BO60739 113 aaKnown RBP2.32□□□□□ -2.04
PRPF4-203ENST00000488937 DEDDO75618 318 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 SLC25A14O95258 325 aaPredicted RBP2.32□□□□□ -2.04
PRPF4-203ENST00000488937 MT-CO2P00403 227 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 HLA-DRB1P01911 266 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 IGHV4-34P06331 123 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 LGALS1P09382 135 aaKnown RBP2.32□□□□□ -2.04
PRPF4-203ENST00000488937 TLX1NBP0CAT3 122 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 S100GP29377 79 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 OR10J1P30954 320 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 EIF1P41567 113 aaKnown RBP2.32□□□□□ -2.04
PRPF4-203ENST00000488937 SRP9P49458 86 aaKnown RBP2.32□□□□□ -2.04
PRPF4-203ENST00000488937 GTF2A1P52655 376 aaPredicted RBP2.32□□□□□ -2.04
PRPF4-203ENST00000488937 RPS20P60866 119 aaKnown RBP2.32□□□□□ -2.04
PRPF4-203ENST00000488937 AP1S1P61966 158 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 SURF2Q15527 256 aaPredicted RBP2.32□□□□□ -2.04
PRPF4-203ENST00000488937 TMEM241Q24JQ0 296 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 C12orf74Q32Q52 190 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 PLPPR5Q32ZL2 321 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 AKR1C8PQ5T2L2 129 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 CYB5R2Q6BCY4 276 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 DCUN1D2Q6PH85 259 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 C5orf46Q6UWT4 87 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 TMPPEQ6ZT21 453 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 ZBTB8OSQ8IWT0 167 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 ORMDL3Q8N138 153 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 EIF4E3Q8N5X7 224 aaKnown RBP2.32□□□□□ -2.04
PRPF4-203ENST00000488937 GDPD1Q8N9F7 314 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 ZNF439Q8NDP4 499 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 OR8A1Q8NGG7 326 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 GNPDA2Q8TDQ7 276 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 SKA2Q8WVK7 121 aaPredicted RBP2.32□□□□□ -2.04
PRPF4-203ENST00000488937 FRZBQ92765 325 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 MAP1LC3BQ9GZQ8 125 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 MED28Q9H204 178 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 PRTFDC1Q9NRG1 225 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 TAAR3PQ9P1P4 343 aa2.32□□□□□ -2.04
PRPF4-203ENST00000488937 DHCR7Q9UBM7 475 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms