RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 DCHS2Q6V1P9 2916 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 A0A087X0M5 115 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 A0A1B0GX30 115 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 CD300LBA8K4G0 201 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 C19orf84I3L1E1 186 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 PGA5P0DJD9 388 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 UCP3P55916 312 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 PKIAP61925 76 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 HLA-DRB3P79483 266 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 PSG7Q13046 419 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 SLC35E3Q7Z769 313 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 BATF2Q8N1L9 274 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 PLPPR2Q96GM1 343 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 SLC25A31Q9H0C2 315 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 ZNF391Q9UJN7 358 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 ZNF732B4DXR9 585 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 SLC31A2O15432 143 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 HSPA12AO43301 675 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 ADAM20O43506 726 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 CDS2O95674 445 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 FUT3P21217 361 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 HERV-K104P61576 105 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 SELENOHQ8IZQ5 122 aaKnown RBP11.18□□□□□ -0.62
CHD1L-208ENST00000488864 CCDC71LQ8N9Z2 235 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 OR13D1Q8NGV5 346 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 ZNF286AQ9HBT8 521 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 DUSP13Q9UII6 198 aa11.18□□□□□ -0.62
CHD1L-208ENST00000488864 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.17□□□□□ -0.62
CHD1L-208ENST00000488864 PHOX2AO14813 284 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 PPYP01298 95 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 GNRHRP30968 328 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 VAMP2P63027 116 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 ZNF154Q13106 437 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 TBC1D26Q86UD7 250 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 LRP11Q86VZ4 500 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 LILRB2Q8N423 598 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 HIST1H2BLQ99880 126 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 SSX3Q99909 188 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 TMEM222Q9H0R3 208 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 UBE2J1Q9Y385 318 aaPredicted RBP11.17□□□□□ -0.62
CHD1L-208ENST00000488864 LOC102723971A0A1B0GUV8 181 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 SIAH2O43255 324 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 NRASP01111 189 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 IL2RGP31785 369 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 CD200P41217 278 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 C3orf36Q3SXR2 165 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 AKR1C8PQ5T2L2 129 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 ZNF695Q8IW36 515 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 CMTM1Q8IZ96 169 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 PACRGQ96M98 296 aaPredicted RBP11.17□□□□□ -0.62
CHD1L-208ENST00000488864 NGBQ9NPG2 151 aa11.17□□□□□ -0.62
CHD1L-208ENST00000488864 IGHV3-64DA0A0J9YX35 117 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 ZNF816-ZNF321PA0A0X1KG74 233 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 J3QW42 95 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 CA6P23280 308 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 RAB11AP62491 216 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 ASCL4Q6XD76 172 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 OSR2Q8N2R0 312 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 PLPPR1Q8TBJ4 325 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 NEUROG1Q92886 237 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 C10orf35Q96D05 121 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 SNX22Q96L94 193 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 GNG13Q9P2W3 67 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 ST3GAL6Q9Y274 331 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 CRYBG3Q68DQ2 2970 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 PLAUP00749 431 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 GCH1P30793 250 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 TAS2R60P59551 318 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 ZNF718Q3SXZ3 478 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 DNLZQ5SXM8 178 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 PLCXD3Q63HM9 321 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 SPSB1Q96BD6 273 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 GNPNAT1Q96EK6 184 aaPredicted RBP11.16□□□□□ -0.62
CHD1L-208ENST00000488864 MISP3Q96FF7 219 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 ATP23Q9Y6H3 246 aa11.16□□□□□ -0.62
CHD1L-208ENST00000488864 AKAP6Q13023 2319 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 CHST1O43916 411 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 RAC2P15153 192 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.62
CHD1L-208ENST00000488864 PRDX4Q13162 271 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 DAZAP2Q15038 168 aaPredicted RBP11.15□□□□□ -0.62
CHD1L-208ENST00000488864 MPV17LQ2QL34 196 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 SPIN3Q5JUX0 258 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 ZNF880Q6PDB4 577 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 C1orf87Q8N0U7 546 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 RBMXL1Q96E39 390 aaKnown RBP11.15□□□□□ -0.62
CHD1L-208ENST00000488864 BORCS8Q96FH0 119 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 TMEM56Q96MV1 263 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 HS3ST6Q96QI5 342 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 TMEM56-RWDD3S4R434 201 aa11.15□□□□□ -0.62
CHD1L-208ENST00000488864 HRNRQ86YZ3 2850 aaPredicted RBP11.15□□□□□ -0.62
CHD1L-208ENST00000488864 TSTD3H0UI37 97 aa11.15□□□□□ -0.63
CHD1L-208ENST00000488864 TIMM8AO60220 97 aaPredicted RBP11.15□□□□□ -0.63
CHD1L-208ENST00000488864 GLRXP35754 106 aa11.15□□□□□ -0.63
CHD1L-208ENST00000488864 RND2P52198 227 aa11.15□□□□□ -0.63
CHD1L-208ENST00000488864 PAX9P55771 341 aa11.15□□□□□ -0.63
CHD1L-208ENST00000488864 TLE4Q04727 773 aa11.15□□□□□ -0.63
CHD1L-208ENST00000488864 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.63
CHD1L-208ENST00000488864 RCC1LQ96I51 464 aaKnown RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms