RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SMIM4Q8WVI0 70 aa8.84□□□□□ -0.99
UBE4B-210ENST00000488228 S1PR3Q99500 378 aa8.84□□□□□ -0.99
UBE4B-210ENST00000488228 SLC25A33Q9BSK2 321 aa8.84□□□□□ -0.99
UBE4B-210ENST00000488228 SDHAF2Q9NX18 166 aa8.84□□□□□ -0.99
UBE4B-210ENST00000488228 C1RLQ9NZP8 487 aa8.84□□□□□ -0.99
UBE4B-210ENST00000488228 PITPNC1Q9UKF7 332 aa8.84□□□□□ -0.99
UBE4B-210ENST00000488228 OR2W1Q9Y3N9 320 aa8.84□□□□□ -0.99
UBE4B-210ENST00000488228 RBM7Q9Y580 266 aaKnown RBP8.84□□□□□ -0.99
UBE4B-210ENST00000488228 FABP12A6NFH5 140 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 SH2D7A6NKC9 451 aaPredicted RBP8.83□□□□□ -1
UBE4B-210ENST00000488228 FAM90A9PA6NNJ1 464 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 GABARAPH6UMI1 98 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 TPPPO94811 219 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 PPYP01298 95 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 CRYBA1P05813 215 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 CT45A6P0DMU7 189 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 CT45A5P0DMU8 189 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 CT45A7P0DMV0 189 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 HKR1P10072 659 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 LUMP51884 338 aaPredicted RBP8.83□□□□□ -1
UBE4B-210ENST00000488228 ACTBP60709 375 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 ZNF79Q15937 498 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 CNPY1Q3B7I2 92 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 Q6ZSV7 163 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 CCDC190Q86UF4 302 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 TMEM17Q86X19 198 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.83□□□□□ -1
UBE4B-210ENST00000488228 OR6Q1Q8NGQ2 317 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 C15orf40Q8WUR7 153 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 FCAMRQ8WWV6 532 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 EAF1Q96JC9 268 aaPredicted RBP8.83□□□□□ -1
UBE4B-210ENST00000488228 SOSTQ9BQB4 213 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 FXYD6Q9H0Q3 95 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 MTFP1Q9UDX5 166 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 PLXNB1O43157 2135 aa8.83□□□□□ -1
UBE4B-210ENST00000488228 DNHD1Q96M86 4753 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 H0YJW9 148 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 OR2F2O95006 317 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 IGLV2-14P01704 120 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 FAM106CPP0CH98 169 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 MDKP21741 143 aaPredicted RBP8.82□□□□□ -1
UBE4B-210ENST00000488228 RPL15P61313 204 aaKnown RBP8.82□□□□□ -1
UBE4B-210ENST00000488228 HERV-K104P61576 105 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 MRPS10P82664 201 aaKnown RBP8.82□□□□□ -1
UBE4B-210ENST00000488228 DYRK1AQ13627 763 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 TMEM95Q3KNT9 176 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 ZNF660Q6AZW8 331 aaPredicted RBP8.82□□□□□ -1
UBE4B-210ENST00000488228 FAAP20Q6NZ36 180 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 OVCH2Q7RTZ1 564 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 Q8N6K4 173 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 ZNF645Q8N7E2 425 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 ZNF383Q8NA42 475 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 OR4D10Q8NGI6 311 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 OR4C13Q8NGP0 309 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 SECTM1Q8WVN6 248 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 RBM14Q96PK6 669 aaKnown RBP8.82□□□□□ -1
UBE4B-210ENST00000488228 GPHA2Q96T91 129 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 ZNF2Q9BSG1 426 aaPredicted RBP8.82□□□□□ -1
UBE4B-210ENST00000488228 TINAGL1Q9GZM7 467 aaPredicted RBP8.82□□□□□ -1
UBE4B-210ENST00000488228 NPFFR1Q9GZQ6 430 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 RAB18Q9NP72 206 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 SIGLEC9Q9Y336 463 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 MOB4Q9Y3A3 225 aa8.82□□□□□ -1
UBE4B-210ENST00000488228 OR5H14A6NHG9 310 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 H7C2Y5 167 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 CTDSPLO15194 276 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 RBBP9O75884 186 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 NDUFA7O95182 113 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 MOSP00540 346 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 CD3DP04234 171 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 AMY1AP04745 511 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 AMY2AP04746 511 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 CNTFRP26992 372 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 CD1BP29016 333 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 ACTBL2Q562R1 376 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 PYDC2Q56P42 97 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 AWAT1Q58HT5 328 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 RNASE10Q5GAN6 216 aaKnown RBP8.81□□□□□ -1
UBE4B-210ENST00000488228 SPANXN2Q5MJ10 180 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 Q6ZS46 218 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 THNSL2Q86YJ6 484 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 OR2T10Q8NGZ9 312 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 RITA1Q96K30 269 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 SLC5A7Q9GZV3 580 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 ZNF702PQ9H963 129 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 CCL28Q9NRJ3 127 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 RABL2AQ9UBK7 228 aaPredicted RBP8.81□□□□□ -1
UBE4B-210ENST00000488228 RABL2BQ9UNT1 228 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 RBMX2Q9Y388 322 aaKnown RBP8.81□□□□□ -1
UBE4B-210ENST00000488228 WASHC3Q9Y3C0 194 aa8.81□□□□□ -1
UBE4B-210ENST00000488228 TMEM89A2RUT3 159 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 LINC00473A8K010 186 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 TNFSF12O43508 249 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 GSTZ1O43708 216 aaPredicted RBP8.8□□□□□ -1
UBE4B-210ENST00000488228 PEX14O75381 377 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 APOA2P02652 100 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 TAS2R19P59542 299 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 BLCAPP62952 87 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 EBI3Q14213 229 aa8.8□□□□□ -1
UBE4B-210ENST00000488228 ABCA11PQ4W5N1 156 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms