RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 MFAP2P55001 183 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 KRTAP10-8P60410 259 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 ERVK-16P61578 105 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 PRDX4Q13162 271 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 KRR1Q13601 381 aaKnown RBP3.22□□□□□ -1.89
BRCA1-217ENST00000487825 APOFQ13790 326 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 DUSP7Q16829 419 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 SLC36A3Q495N2 470 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 PRAMEF5Q5TYX0 476 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 PVRIGQ6DKI7 326 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 CTRB2Q6GPI1 263 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 HEPN1Q6WQI6 88 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 KRTAP11-1Q8IUC1 163 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 C4orf33Q8N1A6 199 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 ASCC1Q8N9N2 400 aaKnown RBP3.22□□□□□ -1.89
BRCA1-217ENST00000487825 CCDC63Q8NA47 563 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 SMYD1Q8NB12 490 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 TRMT10AQ8TBZ6 339 aaKnown RBP3.22□□□□□ -1.89
BRCA1-217ENST00000487825 RNASE8Q8TDE3 154 aaKnown RBP3.22□□□□□ -1.89
BRCA1-217ENST00000487825 AQP3Q92482 292 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 REEP6Q96HR9 211 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 RNF170Q96K19 258 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 RASL11BQ9BPW5 248 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 UQCC2Q9BRT2 126 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 CCDC28BQ9BUN5 200 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 C11orf68Q9H3H3 251 aaKnown RBP3.22□□□□□ -1.89
BRCA1-217ENST00000487825 RIMS4Q9H426 269 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-217ENST00000487825 NMNAT1Q9HAN9 279 aaPredicted RBP3.22□□□□□ -1.89
BRCA1-217ENST00000487825 SLC25A19Q9HC21 320 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 HES4Q9HCC6 221 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 PLSCR3Q9NRY6 295 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 SLC22A13Q9Y226 551 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 PIGLQ9Y2B2 252 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 UTP11Q9Y3A2 253 aaKnown RBP3.22□□□□□ -1.89
BRCA1-217ENST00000487825 MED31Q9Y3C7 131 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 FAT4Q6V0I7 4981 aa3.22□□□□□ -1.89
BRCA1-217ENST00000487825 IGLV2-18A0A075B6J9 118 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 A0A087WZ39 114 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 TOR1AO14656 332 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 ST8SIA3O43173 380 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 SOX15O60248 233 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 SELENOFO60613 162 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 NOS1APO75052 506 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-217ENST00000487825 ZP3P21754 424 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 CFL1P23528 166 aaKnown RBP3.21□□□□□ -1.9
BRCA1-217ENST00000487825 CDK2P24941 298 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 ACKR3P25106 362 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 KIR2DS2P43631 304 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 CDKN1BP46527 198 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 OR1E2P47887 323 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 RAB7AP51149 207 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 BLVRAP53004 296 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 GNG3P63215 75 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 KLF5Q13887 457 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-217ENST00000487825 IL18Q14116 193 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 EIF2B1Q14232 305 aaKnown RBP3.21□□□□□ -1.9
BRCA1-217ENST00000487825 DIAPH2-AS1Q14236 149 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 EDDM3AQ14507 147 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 FAM106AQ4KMX7 169 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 ERICH5Q6P6B1 374 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 HAGHLQ6PII5 290 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-217ENST00000487825 DNM1P34Q6PK57 102 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 SPATA12Q7Z6I5 190 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 ZDHHC21Q8IVQ6 265 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 MICU2Q8IYU8 434 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 SLC7A5P1Q8MH63 180 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 TPRX1Q8N7U7 411 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 MINDY2Q8NBR6 621 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 OR51A7Q8NH64 312 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 UBALD1Q8TB05 177 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 SGK3Q96BR1 496 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 BPIFA2Q96DR5 249 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 PPP1R36Q96LQ0 422 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF488Q96MN9 340 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 TSSK2Q96PF2 358 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 S1PR3Q99500 378 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 GAL3ST2Q9H3Q3 398 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 TMEM38AQ9H6F2 299 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 ZC4H2Q9NQZ6 224 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 AIG1Q9NVV5 245 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 UBQLN2Q9UHD9 624 aa3.21□□□□□ -1.9
BRCA1-217ENST00000487825 AMMECR1Q9Y4X0 333 aaPredicted RBP3.21□□□□□ -1.9
BRCA1-217ENST00000487825 MUC2Q02817 5179 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 TRAV6A0A075B6T7 132 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 TRAV41A0A0B4J266 112 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 LOC100506127A0A0U1RQW1 187 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 OR5B21A6NL26 309 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 ZNF732B4DXR9 585 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 WRBO00258 174 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 TYROBPO43914 113 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 IGHV3-11P01762 117 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 CD74P04233 296 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 IL6P05231 212 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 CALCBP10092 127 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 PRB4P10163 310 aaPredicted RBP3.2□□□□□ -1.9
BRCA1-217ENST00000487825 IFI30P13284 250 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 LBPP18428 481 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 CRABP1P29762 137 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 ALDH3A1P30838 453 aa3.2□□□□□ -1.9
BRCA1-217ENST00000487825 PRKXP51817 358 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms