RNA–Protein interactions for RNA: ENST00000487065.5

STAG1-208, Transcript of stromal antigen 1, humanhuman

TSL 1 (best)

Gene STAG1, Length 2,914 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-208ENST00000487065 SFRP4Q6FHJ7 346 aaPredicted RBP6.04□□□□□ -1.44
STAG1-208ENST00000487065 PRSS54Q6PEW0 395 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 OR4D5Q8NGN0 318 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 NEIL1Q96FI4 390 aaPredicted RBP6.04□□□□□ -1.44
STAG1-208ENST00000487065 AGMATQ9BSE5 352 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 CALYQ9NYX4 217 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 AMMECR1Q9Y4X0 333 aaPredicted RBP6.04□□□□□ -1.44
STAG1-208ENST00000487065 KPTNQ9Y664 436 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 hCG_1809904A0A1W2PP81 198 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 A0A1W2PPE2 198 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 A0A1W2PR64 198 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 A0A1W2PRV1 198 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 A6NIN4 97 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 M0QYG6 137 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 RAB29O14966 203 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 SPDEFO95238 335 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 IGLV2-14P01704 120 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 RBMXP38159 391 aaKnown RBP6.04□□□□□ -1.44
STAG1-208ENST00000487065 BAXQ07812 192 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 NKAPLQ5M9Q1 402 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 PRAMEF6Q5VXH4 476 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 PVRIGQ6DKI7 326 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 ZNF841Q6ZN19 808 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 C9orf62Q8N4C0 152 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 KCNRGQ8N5I3 272 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 MARCH1Q8TCQ1 289 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 ARV1Q9H2C2 271 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 PATZ1Q9HBE1 687 aaKnown RBP6.04□□□□□ -1.44
STAG1-208ENST00000487065 TAF9BQ9HBM6 251 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 CHMP1AQ9HD42 196 aaPredicted RBP6.04□□□□□ -1.44
STAG1-208ENST00000487065 DYNLRB1Q9NP97 96 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 MAB21L2Q9Y586 359 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 SESN1Q9Y6P5 492 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 SPENQ96T58 3664 aaKnown RBP6.04□□□□□ -1.44
STAG1-208ENST00000487065 RELNP78509 3460 aa6.04□□□□□ -1.44
STAG1-208ENST00000487065 SETD2Q9BYW2 2564 aaPredicted RBP6.03□□□□□ -1.44
STAG1-208ENST00000487065 C3orf85A0A1B0GTC6 90 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 HLA-AP01891 365 aaKnown RBP6.03□□□□□ -1.44
STAG1-208ENST00000487065 HBZP02008 142 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 IL3RAP26951 378 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 DUSP1P28562 367 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 P2RY1P47900 373 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 DYNLT3P51808 116 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 MORN2Q502X0 79 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 LILRB2Q8N423 598 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 OR11H6Q8NGC7 330 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 OR4F5Q8NH21 305 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 RTN4IP1Q8WWV3 396 aaPredicted RBP6.03□□□□□ -1.44
STAG1-208ENST00000487065 RBPMSQ93062 196 aaKnown RBP6.03□□□□□ -1.44
STAG1-208ENST00000487065 ST6GALNAC5Q9BVH7 336 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 TRAPPC2LQ9UL33 140 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 TNFSF18Q9UNG2 199 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 AUP1Q9Y679 476 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 NDUFB3O43676 98 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 MED6O75586 246 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 PGLYRP1O75594 196 aaPredicted RBP6.03□□□□□ -1.44
STAG1-208ENST00000487065 GRPP07492 148 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 NFYAP23511 347 aaPredicted RBP6.03□□□□□ -1.44
STAG1-208ENST00000487065 MAS1LP35410 378 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 LMO4P61968 165 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 MINOS1Q5TGZ0 78 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 ZNF429Q86V71 674 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 SLC7A5P1Q8MH63 180 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 DYRK2Q92630 601 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 MSL2Q9HCI7 577 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 ZNF257Q9Y2Q1 563 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 MINOS1-NBL1R4GNA1 71 aa6.03□□□□□ -1.44
STAG1-208ENST00000487065 FBN1P35555 2871 aaKnown RBP6.03□□□□□ -1.44
STAG1-208ENST00000487065 A6NLC8 198 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 SSNA1O43805 119 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 BRI3O95415 125 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 ANXA7P20073 488 aaKnown RBP6.02□□□□□ -1.45
STAG1-208ENST00000487065 PRTN3P24158 256 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 ID3Q02535 119 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 ABCA11PQ4W5N1 156 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 C11orf87Q6NUJ2 197 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 TCF23Q7RTU1 214 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 MRGPRDQ8TDS7 321 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 BEX1Q9HBH7 125 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 TBL2Q9Y4P3 447 aaKnown RBP6.02□□□□□ -1.45
STAG1-208ENST00000487065 TSC22D2O75157 780 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 HNRNPCP07910 306 aaKnown RBP eCLIP6.02□□□□□ -1.455e-7■■□□□ 14.5
STAG1-208ENST00000487065 PIGPP57054 158 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 NCR3LG1Q68D85 454 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 ACOT7LQ6ZUV0 252 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 SELENOHQ8IZQ5 122 aaKnown RBP6.02□□□□□ -1.45
STAG1-208ENST00000487065 ZBTB8BQ8NAP8 495 aaPredicted RBP6.02□□□□□ -1.45
STAG1-208ENST00000487065 GLYATL2Q8WU03 294 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 WFDC12Q8WWY7 111 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 RAB40CQ96S21 281 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 GGACTQ9BVM4 153 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 SLC5A7Q9GZV3 580 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 RDH8Q9NYR8 311 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 KIF25Q9UIL4 384 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 ELF5Q9UKW6 265 aaPredicted RBP6.02□□□□□ -1.45
STAG1-208ENST00000487065 CSPG4Q6UVK1 2322 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 TRAV6A0A075B6T7 132 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 E5RGE8 158 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 HPRT1P00492 218 aa6.02□□□□□ -1.45
STAG1-208ENST00000487065 SCTP09683 121 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms