RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 VPS37CA5D8V6 355 aaPredicted RBP2.04□□□□□ -2.08
SMC4-218ENST00000486711 F5H768 121 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 TRAPPC3O43617 180 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 SOD1P00441 154 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 OCM2P0CE71 109 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 ZNF7P17097 686 aaPredicted RBP2.04□□□□□ -2.08
SMC4-218ENST00000486711 CXCL3P19876 107 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 CSRP1P21291 193 aaKnown RBP2.04□□□□□ -2.08
SMC4-218ENST00000486711 NPPCP23582 126 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 OR10J1P30954 320 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 COL18A1P39060 1754 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 EMP2P54851 167 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 HSP90B2PQ58FF3 399 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 KRTAP13-1Q8IUC0 172 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 FNDC9Q8TBE3 224 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 C16orf78Q8WTQ4 265 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 NKX6-2Q9C056 277 aaPredicted RBP2.04□□□□□ -2.08
SMC4-218ENST00000486711 C11orf1Q9H5F2 150 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 USE1Q9NZ43 259 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 EMC3Q9P0I2 261 aa2.04□□□□□ -2.08
SMC4-218ENST00000486711 ZNF407Q9C0G0 2248 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 COL5A1P20908 1838 aaPredicted RBP2.03□□□□□ -2.08
SMC4-218ENST00000486711 UBE2L6O14933 153 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 PFDN6O15212 129 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 IL6P05231 212 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 CXCL2P19875 107 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 BLVRBP30043 206 aaPredicted RBP2.03□□□□□ -2.08
SMC4-218ENST00000486711 CDC34P49427 236 aaPredicted RBP2.03□□□□□ -2.08
SMC4-218ENST00000486711 FABP5Q01469 135 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 GNA13Q14344 377 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 SLC36A2Q495M3 483 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 TNFAIP8L2Q6P589 184 aaPredicted RBP2.03□□□□□ -2.08
SMC4-218ENST00000486711 AMTNQ6UX39 209 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 ZNF767PQ75MW2 155 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 MS4A6EQ96DS6 147 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 DERL2Q9GZP9 239 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 PSORS1C2Q9UIG4 136 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 ZNF337Q9Y3M9 751 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 MINOS1-NBL1R4GNA1 71 aa2.03□□□□□ -2.08
SMC4-218ENST00000486711 TRGV4A0A0C4DH28 118 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 ODF3BA8MYP8 253 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 SLC17A3O00476 420 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 CRHBPP24387 322 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 MAGEA2P43356 314 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 DAPP51397 102 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 N4BP2L1Q5TBK1 243 aaPredicted RBP2.02□□□□□ -2.09
SMC4-218ENST00000486711 CST9Q5W186 159 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 NAA40Q86UY6 237 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 BAP18Q8IXM2 172 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 CPNE2Q96FN4 548 aaPredicted RBP2.02□□□□□ -2.09
SMC4-218ENST00000486711 HES4Q9HCC6 221 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 SLC2A9Q9NRM0 540 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 FGFR1OP2Q9NVK5 253 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 CCL26Q9Y258 94 aa2.02□□□□□ -2.09
SMC4-218ENST00000486711 PCYT1BQ9Y5K3 369 aaPredicted RBP2.02□□□□□ -2.09
SMC4-218ENST00000486711 NLRC5Q86WI3 1866 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 DHX57Q6P158 1386 aaKnown RBP2.01□□□□□ -2.09
SMC4-218ENST00000486711 C19orf71A6NCJ1 209 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 C17orf51A8MQB3 221 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 H3BPC8 53 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 DEXIO95424 95 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 MT-CO2P00403 227 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 TYMSP04818 313 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 CD36P16671 472 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 GABRA4P48169 554 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 CDK9P50750 372 aaKnown RBP2.01□□□□□ -2.09
SMC4-218ENST00000486711 BLVRAP53004 296 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 TMEM33P57088 247 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 SNAP25P60880 206 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 HLA-DRB3P79483 266 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 TMEM31Q5JXX7 168 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 SLC51BQ86UW2 128 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 DDI1Q8WTU0 396 aa2.01□□□□□ -2.09
SMC4-218ENST00000486711 TMEM235A6NFC5 223 aa2□□□□□ -2.09
SMC4-218ENST00000486711 KNCNA6PVL3 124 aa2□□□□□ -2.09
SMC4-218ENST00000486711 M0R381 172 aa2□□□□□ -2.09
SMC4-218ENST00000486711 SLC16A4O15374 487 aa2□□□□□ -2.09
SMC4-218ENST00000486711 GZMBP10144 247 aa2□□□□□ -2.09
SMC4-218ENST00000486711 COX5BP10606 129 aa2□□□□□ -2.09
SMC4-218ENST00000486711 DDTP30046 118 aa2□□□□□ -2.09
SMC4-218ENST00000486711 CXCR4P61073 352 aa2□□□□□ -2.09
SMC4-218ENST00000486711 FOXF1Q12946 379 aa2□□□□□ -2.09
SMC4-218ENST00000486711 OGFRL1Q5TC84 451 aaPredicted RBP2□□□□□ -2.09
SMC4-218ENST00000486711 LRRC34Q8IZ02 419 aa2□□□□□ -2.09
SMC4-218ENST00000486711 PIGXQ8TBF5 258 aa2□□□□□ -2.09
SMC4-218ENST00000486711 C12orf43Q96C57 262 aaKnown RBP2□□□□□ -2.09
SMC4-218ENST00000486711 ANKRD36BP1Q96IX9 119 aa2□□□□□ -2.09
SMC4-218ENST00000486711 MIEN1Q9BRT3 115 aa2□□□□□ -2.09
SMC4-218ENST00000486711 TMEM109Q9BVC6 243 aa2□□□□□ -2.09
SMC4-218ENST00000486711 C16orf95Q9H693 158 aa2□□□□□ -2.09
SMC4-218ENST00000486711 TRPM3Q9HCF6 1732 aaPredicted RBP2□□□□□ -2.09
SMC4-218ENST00000486711 OR11H12B2RN74 326 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 FNDC10F2Z333 226 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 LY6LH3BQJ8 138 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 M0QZ92 97 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 C8orf88P0DMB2 117 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 CRYBB3P26998 211 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 RPS24P62847 133 aaKnown RBP1.99□□□□□ -2.09
SMC4-218ENST00000486711 HOXC5Q00444 222 aa1.99□□□□□ -2.09
SMC4-218ENST00000486711 GNA12Q03113 381 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms