RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ADORA3P0DMS8 318 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 PPIBP23284 216 aaKnown RBP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 FASP25445 335 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 IFNGR2P38484 337 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 MDH2P40926 338 aaKnown RBP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 CLDN12P56749 244 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 SEC61A1P61619 476 aaKnown RBP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 BTG1P62324 171 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 SLC35B1P78383 322 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 MRPS10P82664 201 aaKnown RBP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 EWSR1Q01844 656 aaKnown RBP eCLIP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 HNRNPA0Q13151 305 aaKnown RBP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 OR1Q1Q15612 314 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 PRSS8Q16651 343 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 C2orf68Q2NKX9 166 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 RABL3Q5HYI8 236 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 ACTL10Q5JWF8 245 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 Q6YL49 198 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF620Q6ZNG0 422 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 SLC30A8Q8IWU4 369 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 SMIM20Q8N5G0 67 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 FITM2Q8N6M3 262 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 OR13G1Q8NGZ3 307 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 OR1P1Q8NH06 330 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 OR8U1Q8NH10 309 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 OR5J2Q8NH18 312 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 LYPD6BQ8NI32 183 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 PLPPR1Q8TBJ4 325 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 SLC25A40Q8TBP6 338 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 KLF14Q8TD94 323 aaPredicted RBP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 GEMIN6Q8WXD5 167 aaKnown RBP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 DYRK2Q92630 601 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 SLC25A44Q96H78 314 aaPredicted RBP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 PYURFQ96I23 114 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 NARS2Q96I59 477 aaKnown RBP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 OR10C1Q96KK4 312 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 UHRF2Q96PU4 802 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 ATP5SQ99766 215 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 CHIAQ9BZP6 476 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF556Q9HAH1 456 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 BCL2L10Q9HD36 194 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 DCAF13Q9NV06 445 aaKnown RBP5.56□□□□□ -1.52
HDAC3-209ENST00000486618 LGALS13Q9UHV8 139 aa5.56□□□□□ -1.52
HDAC3-209ENST00000486618 CMYA5Q8N3K9 4069 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 TET2Q6N021 2002 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-209ENST00000486618 IGHV2-70DA0A0C4DH43 119 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 MDFIC2A0A1B0GVS7 189 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 C5orf49A4QMS7 147 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 LINC00862A6NCI5 91 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF878C9JN71 531 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 C11orf98E9PRG8 122 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 H0YL77 283 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 VCYO14598 125 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 MRASO14807 208 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 MPZL2O60487 215 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 IGHG1P01857 330 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 MMP7P09237 267 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-209ENST00000486618 NPSP0C0P6 89 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 DUX4L4P0CJ87 422 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 S100A7P31151 101 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 FGF9P31371 208 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-209ENST00000486618 MPV17P39210 176 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 HTR5AP47898 357 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 POLR2JP52435 117 aaKnown RBP5.55□□□□□ -1.52
HDAC3-209ENST00000486618 CLRN1P58418 232 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 CKS1BP61024 79 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 PPP1CBP62140 327 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 SELENOTP62341 195 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 GNB2P62879 340 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 SPHARQ15513 63 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 SURF2Q15527 256 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-209ENST00000486618 TAL2Q16559 108 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 BEAN1Q3B7T3 259 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF585BQ52M93 769 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 PABPC1L2AQ5JQF8 200 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 ARL9Q6T311 187 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 BRD3OSQ6XYD6 125 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 Q8N1X5 172 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 OR4S2Q8NH73 311 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 OR56B4Q8NH76 319 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 LINC01006Q8NI28 216 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 NPRL2Q8WTW4 380 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 SSMEM1Q8WWF3 244 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 QTRT1Q9BXR0 403 aaKnown RBP5.55□□□□□ -1.52
HDAC3-209ENST00000486618 OR2J1Q9GZK6 312 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 MSL2Q9HCI7 577 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 AIG1Q9NVV5 245 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 RSL24D1Q9UHA3 163 aaKnown RBP5.55□□□□□ -1.52
HDAC3-209ENST00000486618 FBXO7Q9Y3I1 522 aa5.55□□□□□ -1.52
HDAC3-209ENST00000486618 SOX21Q9Y651 276 aaPredicted RBP5.55□□□□□ -1.52
HDAC3-209ENST00000486618 A0A0B4J2E0 115 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF816-ZNF321PA0A0X1KG74 233 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 A0A1B0GX12 115 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 CEACAM18A8MTB9 384 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 C15orf65H3BRN8 121 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 AP4M1O00189 453 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 CLIC1O00299 241 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 ITM2AO43736 263 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 ENSAO43768 121 aaKnown RBP5.54□□□□□ -1.52
HDAC3-209ENST00000486618 SLC22A5O76082 557 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms