RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 OR1A1Q9P1Q5 309 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 ZNRD1Q9P1U0 126 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 FLVCR2Q9UPI3 526 aa13.82□□□□□ -0.2
VIM-205ENST00000485947 YPEL1O60688 119 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 RLN1P04808 185 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 CTSDP07339 412 aaPredicted RBP13.81□□□□□ -0.2
VIM-205ENST00000485947 ZNF728P0DKX0 622 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 CEACAM6P40199 344 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 UBE2MP61081 183 aaKnown RBP13.81□□□□□ -0.2
VIM-205ENST00000485947 PRR31Q5SQ13 230 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 SLC38A6Q8IZM9 456 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 RFESDQ8TAC1 157 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 UBALD1Q8TB05 177 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 EDARADDQ8WWZ3 215 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 ZNF486Q96H40 463 aaPredicted RBP13.81□□□□□ -0.2
VIM-205ENST00000485947 YPEL2Q96QA6 119 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 RDH8Q9NYR8 311 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 C1RLQ9NZP8 487 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 C14orf166Q9Y224 244 aaKnown RBP13.81□□□□□ -0.2
VIM-205ENST00000485947 VSIG4Q9Y279 399 aa13.81□□□□□ -0.2
VIM-205ENST00000485947 ITGB1BP1O14713 200 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 IL5P05113 134 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 SAA4P35542 130 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 LUMP51884 338 aaPredicted RBP13.8□□□□□ -0.2
VIM-205ENST00000485947 FXYD4P59646 89 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 ERVFRD-1P60508 538 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 Q3ZCU0 254 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 HEPN1Q6WQI6 88 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 BEND2Q8NDZ0 799 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 OR52L2PQ8NGH6 319 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 OR10V1Q8NGI7 309 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 TOMM40LQ969M1 308 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 GFOD1Q9NXC2 390 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 GNG12Q9UBI6 72 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 VPREB3Q9UKI3 123 aa13.8□□□□□ -0.2
VIM-205ENST00000485947 MEX3AA1L020 520 aaKnown RBP13.79□□□□□ -0.2
VIM-205ENST00000485947 CLPSL1A2RUU4 121 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 GPR137BO60478 399 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 IGHV4-59P01825 116 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 DLX6P56179 175 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 LOXL3P58215 753 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 MSMO1Q15800 293 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 TATDN3Q17R31 274 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 SLC25A42Q86VD7 318 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 PDZD9Q8IXQ8 264 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 RSRP1Q9BUV0 290 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 MEGF9Q9H1U4 602 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 GPN1Q9HCN4 374 aaPredicted RBP13.79□□□□□ -0.2
VIM-205ENST00000485947 PKD1L1Q8TDX9 2849 aa13.79□□□□□ -0.2
VIM-205ENST00000485947 A0A1B0GVG6 124 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 C7orf66A4D0T2 115 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 C17orf98A8MV24 154 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 SLC22A5O76082 557 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 CCL3L1P16619 93 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 ANXA7P20073 488 aaKnown RBP13.78□□□□□ -0.2
VIM-205ENST00000485947 MDKP21741 143 aaPredicted RBP13.78□□□□□ -0.2
VIM-205ENST00000485947 PPP1CCP36873 323 aaKnown RBP13.78□□□□□ -0.2
VIM-205ENST00000485947 RAB25P57735 213 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 GNMTQ14749 295 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 MORN2Q502X0 79 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 C11orf88Q6PI97 169 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 GLDNQ6ZMI3 551 aaPredicted RBP13.78□□□□□ -0.2
VIM-205ENST00000485947 TMED4Q7Z7H5 227 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 C11orf42Q8N5U0 333 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 CCDC71LQ8N9Z2 235 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 RTBDNQ9BSG5 229 aaPredicted RBP13.78□□□□□ -0.2
VIM-205ENST00000485947 SLC5A7Q9GZV3 580 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 C5orf66Q9H5L9 145 aa13.78□□□□□ -0.2
VIM-205ENST00000485947 RBM7Q9Y580 266 aaKnown RBP13.78□□□□□ -0.2
VIM-205ENST00000485947 IGHV3-43A0A0B4J1X8 118 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 A0A0B4J293 547 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 IGKV1D-13A0A0B4J2D9 117 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 GPR31O00270 319 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 IGHV3-43DP0DP04 118 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 IGKV1-13P0DP09 117 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 OMGP23515 440 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 S100GP29377 79 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 RAB7AP51149 207 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 RND3P61587 244 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 DHODHQ02127 395 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 LTC4SQ16873 150 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 ABCA11PQ4W5N1 156 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 TMEM128Q5BJH2 165 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 PRAMEF5Q5TYX0 476 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 HCP5Q6MZN7 132 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 SECTM1Q8WVN6 248 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 AKR1E2Q96JD6 320 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 C16orf95Q9H693 158 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 RAB18Q9NP72 206 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 TNFRSF19Q9NS68 423 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 ALG5Q9Y673 324 aa13.77□□□□□ -0.21
VIM-205ENST00000485947 SNRPGP15A8MWD9 76 aa13.76□□□□□ -0.21
VIM-205ENST00000485947 OR4E1P0C645 316 aa13.76□□□□□ -0.21
VIM-205ENST00000485947 LGALS4P56470 323 aa13.76□□□□□ -0.21
VIM-205ENST00000485947 RELBQ01201 579 aa13.76□□□□□ -0.21
VIM-205ENST00000485947 KLRD1Q13241 179 aa13.76□□□□□ -0.21
VIM-205ENST00000485947 LIAT1Q6ZQX7 453 aa13.76□□□□□ -0.21
VIM-205ENST00000485947 ZNF645Q8N7E2 425 aa13.76□□□□□ -0.21
VIM-205ENST00000485947 ZBTB34Q8NCN2 500 aa13.76□□□□□ -0.21
VIM-205ENST00000485947 OR13D1Q8NGV5 346 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms