RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 C10orf25Q5T742 122 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 ELP2Q6IA86 826 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 HACD2Q6Y1H2 254 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 ODF3L1Q8IXM7 274 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 TMEM61Q8N0U2 210 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 TCEANCQ8N8B7 351 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 OR52B4Q8NGK2 314 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 CNN2Q99439 309 aaKnown RBP4.82□□□□□ -1.64
SMC4-217ENST00000485867 PARP12Q9H0J9 701 aaKnown RBP4.82□□□□□ -1.64
SMC4-217ENST00000485867 TECRQ9NZ01 308 aaKnown RBP4.82□□□□□ -1.64
SMC4-217ENST00000485867 ZNF581Q9P0T4 197 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 GNG12Q9UBI6 72 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 DNAH5Q8TE73 4624 aa4.82□□□□□ -1.64
SMC4-217ENST00000485867 A0A0B4J203 849 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 KIR2DL5BA0A0G2JN68 375 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 KIR2DL5BA0A0G2JPC4 375 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 CA2P00918 260 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 MT-ND2P03891 347 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 OCM2P0CE71 109 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 OCMP0CE72 109 aaPredicted RBP4.81□□□□□ -1.64
SMC4-217ENST00000485867 UBCP0CG48 685 aaKnown RBP4.81□□□□□ -1.64
SMC4-217ENST00000485867 COX4I1P13073 169 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 AADACP22760 399 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 MFAP2P55001 183 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 PSME3P61289 254 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 ZSCAN26Q16670 478 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 LGALS9BQ3B8N2 356 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 TMEM30BQ3MIR4 351 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 PIGYQ3MUY2 71 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 FAM131AQ6UXB0 335 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 ZNF562Q6V9R5 426 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 SSX6Q7RTT6 188 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 KCTD20Q7Z5Y7 419 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 SLC35F2Q8IXU6 374 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 KIR2DL5AQ8N109 375 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 PRSS35Q8N3Z0 413 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 SUMF2Q8NBJ7 301 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 OR5T1Q8NG75 326 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 OR13C9Q8NGT0 318 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 OR10AC1Q8NH08 325 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 KIR2DL5BQ8NHK3 375 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 GRPEL2Q8TAA5 225 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 CCDC107Q8WV48 283 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 SNAPC3Q92966 411 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 FGGYQ96C11 551 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 NSMCE2Q96MF7 247 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 CLCC1Q96S66 551 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 C11orf68Q9H3H3 251 aaKnown RBP4.81□□□□□ -1.64
SMC4-217ENST00000485867 RAB21Q9UL25 225 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 SAMHD1Q9Y3Z3 626 aaKnown RBP4.81□□□□□ -1.64
SMC4-217ENST00000485867 SELENOKQ9Y6D0 94 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 NACAE9PAV3 2078 aa4.81□□□□□ -1.64
SMC4-217ENST00000485867 MYCBP2O75592 4640 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 ZNF670-ZNF695F2Z2N8 137 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 ARPC2O15144 300 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 KRT8P05787 483 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 TMEM225BP0DP42 221 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 FCGR2BP31994 310 aaPredicted RBP4.8□□□□□ -1.64
SMC4-217ENST00000485867 OR3A3P47888 321 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 CDK5Q00535 292 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 ALKBH1Q13686 389 aaKnown RBP4.8□□□□□ -1.64
SMC4-217ENST00000485867 GNMTQ14749 295 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 ZNF833PQ6ZTB9 187 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 POM121L12Q8N7R1 296 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 OR10G2Q8NGC3 310 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 OR1L1Q8NH94 360 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 CACNG8Q8WXS5 425 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 FEVQ99581 238 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 ABHD14AQ9BUJ0 271 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 EFCAB1Q9HAE3 211 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 ADGRL4Q9HBW9 690 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 CLN6Q9NWW5 311 aa4.8□□□□□ -1.64
SMC4-217ENST00000485867 RCC2Q9P258 522 aaKnown RBP4.8□□□□□ -1.64
SMC4-217ENST00000485867 IGHV4-4A0A075B6R2 117 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 SAA2-SAA4A0A096LPE2 208 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 C11orf94C9JXX5 98 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 AIPO00170 330 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 SLC22A1O15245 554 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 SPINT2O43291 252 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 FADS2O95864 444 aaKnown RBP4.79□□□□□ -1.64
SMC4-217ENST00000485867 HBZP02008 142 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 MT-ND4P03905 459 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 SAA2P0DJI9 122 aaPredicted RBP4.79□□□□□ -1.64
SMC4-217ENST00000485867 ADARB1P78563 741 aaKnown RBP4.79□□□□□ -1.64
SMC4-217ENST00000485867 EXOSC2Q13868 293 aaKnown RBP4.79□□□□□ -1.64
SMC4-217ENST00000485867 FXYD3Q14802 87 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 ANKRD55Q3KP44 614 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 MORN2Q502X0 79 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 ZNF691Q5VV52 312 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 TMEM236Q5W0B7 351 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 ZNF57Q68EA5 555 aaPredicted RBP4.79□□□□□ -1.64
SMC4-217ENST00000485867 OR2T5Q6IEZ7 315 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 CGB2Q6NT52 195 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 ZNF497Q6ZNH5 498 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 Q6ZR54 194 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 PXT1Q8NFP0 134 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 OR10K1Q8NGX5 313 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 OR2T29Q8NH02 315 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 KCNG3Q8TAE7 436 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 GHSRQ92847 366 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms