RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 PHYHIPLQ96FC7 376 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 SMIM8Q96KF7 97 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 C17orf77Q96MU5 243 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 OR2A7Q96R45 310 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 TRIB3Q96RU7 358 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 MRPL57Q9BQC6 102 aaKnown RBP3.66□□□□□ -1.82
RTN4-213ENST00000485749 RTBDNQ9BSG5 229 aaPredicted RBP3.66□□□□□ -1.82
RTN4-213ENST00000485749 LRRC61Q9BV99 259 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 PBOV1Q9GZY1 135 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 MED28Q9H204 178 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 TAAR2Q9P1P5 351 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 LAMTOR3Q9UHA4 124 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 VDAC3Q9Y277 283 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 HS3ST2Q9Y278 367 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 SOX21Q9Y651 276 aaPredicted RBP3.66□□□□□ -1.82
RTN4-213ENST00000485749 TAF1P21675 1872 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 NFASCO94856 1347 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 COL18A1P39060 1754 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 MYH8P13535 1937 aa3.66□□□□□ -1.82
RTN4-213ENST00000485749 YLPM1P49750 1951 aaKnown RBP3.65□□□□□ -1.82
RTN4-213ENST00000485749 ZNF142P52746 1687 aaPredicted RBP3.65□□□□□ -1.82
RTN4-213ENST00000485749 SLIT2O94813 1529 aa3.65□□□□□ -1.82
RTN4-213ENST00000485749 TRAV5A0A0B4J249 113 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 A0A0G2JND7 137 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 NCBP2LA6PVI3 153 aaKnown RBP3.65□□□□□ -1.83
RTN4-213ENST00000485749 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.65□□□□□ -1.83
RTN4-213ENST00000485749 TYROBPO43914 113 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 NUDT14O95848 222 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 AMBPP02760 352 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 SNRPCP09234 159 aaKnown RBP3.65□□□□□ -1.83
RTN4-213ENST00000485749 PGA4P0DJD7 388 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 PGA3P0DJD8 388 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 PGA5P0DJD9 388 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 HOXB6P17509 224 aaKnown RBP3.65□□□□□ -1.83
RTN4-213ENST00000485749 ATP6V0CP27449 155 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 BRS3P32247 399 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 PFN2P35080 140 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 PPICP45877 212 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 TAF6P49848 677 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 POLR2HP52434 150 aaKnown RBP3.65□□□□□ -1.83
RTN4-213ENST00000485749 S100A10P60903 97 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 EIF5AP63241 154 aaKnown RBP3.65□□□□□ -1.83
RTN4-213ENST00000485749 PSG9Q00887 426 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 MEF2CQ06413 473 aaPredicted RBP3.65□□□□□ -1.83
RTN4-213ENST00000485749 IL15RAQ13261 267 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 ZNF266Q14584 549 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 RBMS2Q15434 407 aaKnown RBP3.65□□□□□ -1.83
RTN4-213ENST00000485749 TIMM50Q3ZCQ8 353 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 VAX1Q5SQQ9 334 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 FHL5Q5TD97 284 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 LYRM7Q5U5X0 104 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 GLT8D1Q68CQ7 371 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 SCGB1D4Q6XE38 83 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 DGAT2L6Q6ZPD8 337 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 Q6ZSR6 202 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 ZNF550Q7Z398 422 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 RBM23Q86U06 439 aaKnown RBP3.65□□□□□ -1.83
RTN4-213ENST00000485749 PIANPQ8IYJ0 282 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 ANKRD29Q8N6D5 301 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 MAPKAPK5-AS1Q8N8E1 139 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 SPATA3Q8NHX4 192 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 SLAMF6Q96DU3 332 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 FMC1Q96HJ9 113 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 TMEM101Q96IK0 257 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 SLC35E1Q96K37 410 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 IP6K3Q96PC2 410 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 METTL26Q96S19 204 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 MGLLQ99685 303 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 MCHR1Q99705 422 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 C1QTNF4Q9BXJ3 329 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 FGFBP2Q9BYJ0 223 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 OR8D2Q9GZM6 311 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 OR52D1Q9H346 318 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 RERGLQ9H628 205 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 FAM49BQ9NUQ9 324 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 SLC23A2Q9UGH3 650 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 ORC6Q9Y5N6 252 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 SELENOKQ9Y6D0 94 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 CHD4Q14839 1912 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 MAST2Q6P0Q8 1798 aa3.65□□□□□ -1.83
RTN4-213ENST00000485749 TNRC6CQ9HCJ0 1690 aaKnown RBP3.65□□□□□ -1.83
RTN4-213ENST00000485749 ANKRD36CQ5JPF3 1778 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 LOC101059948A0A1B0GTJ6 334 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 A0A1B0GWB2 263 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 C5orf49A4QMS7 147 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 LINC01553A4QN01 128 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 MEIS3P1A6NDR6 274 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 RBFOX3A6NFN3 312 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 NPIPB9F8W1W9 429 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 K7EPK0 472 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 PROSCO94903 275 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 KCNK2O95069 426 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 PMS2P2O95744 297 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 APODP05090 189 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 MMP7P09237 267 aaPredicted RBP3.64□□□□□ -1.83
RTN4-213ENST00000485749 LGALS1P09382 135 aaKnown RBP3.64□□□□□ -1.83
RTN4-213ENST00000485749 SCTP09683 121 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 OR9G9P0C7N8 305 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 CT45A10P0DMU9 189 aa3.64□□□□□ -1.83
RTN4-213ENST00000485749 PRTN3P24158 256 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms