RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 Q6ZRM9 215 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 LINC01551Q86U37 167 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 GGNQ86UU5 652 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 ZNF573Q86YE8 665 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 MKXQ8IYA7 352 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 NAXEQ8NCW5 288 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 TSTD1Q8NFU3 115 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 OR10V1Q8NGI7 309 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 KCNE4Q8WWG9 221 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 ZCCHC14Q8WYQ9 949 aaKnown RBP3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 RAB1CQ92928 201 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 CLDN23Q96B33 292 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 GMPPAQ96IJ6 420 aaPredicted RBP3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 YPEL2Q96QA6 119 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 OR4C12Q96R67 309 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 FOXB1Q99853 325 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 TXNDC17Q9BRA2 123 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 PCGF1Q9BSM1 259 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 PKIBQ9C010 78 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 SLC39A9Q9NUM3 307 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 HSPB7Q9UBY9 170 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 NAGKQ9UJ70 344 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 FUT9Q9Y231 359 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 MSRB2Q9Y3D2 182 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 PXMP4Q9Y6I8 212 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 PDE4DIPQ5VU43 2346 aa3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 GOLGA4Q13439 2230 aaKnown RBP3.95□□□□□ -1.78
SMARCC1-206ENST00000485737 FER1L5A0AVI2 2057 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 IGKV3D-15A0A087WSY6 115 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 TRAV24A0A0B4J272 114 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 CCDC163A0A0D9SF12 145 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 OR5B21A6NL26 309 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 PMS2P5A8MQ11 134 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 ZNF705GA8MUZ8 300 aaPredicted RBP3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 TRAPPC2LH3BP13 241 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 AQP7O14520 342 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 TNFSF12O43508 249 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 PDE6DO43924 150 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 TNFSF13O75888 250 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 MMP23AO75900 390 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 WISP2O76076 250 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 NXPH3O95157 252 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 CCL3P10147 92 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 IAPPP10997 89 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 COX6A1P12074 109 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 COX5AP20674 150 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 TUBG1P23258 451 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 SRD5A2P31213 254 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 TNFSF10P50591 281 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 ELLP55199 621 aaPredicted RBP3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 CASP6P55212 293 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 GNB2P62879 340 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 SUMO1P63165 101 aaKnown RBP3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 PAFAH1B2P68402 229 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 EIF4EBP1Q13541 118 aaPredicted RBP3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 PDCD1Q15116 288 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 ZNF585BQ52M93 769 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 PRAMEF20Q5VT98 475 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 AAED1Q7RTV5 226 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 SLC25A45Q8N413 288 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 C17orf78Q8N4C9 275 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 ZBTB34Q8NCN2 500 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 OR56B2PQ8NGI1 322 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 OR5A2Q8NGI9 324 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 OR51H1Q8NH63 302 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 OR10J5Q8NHC4 309 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 OR5P3Q8WZ94 311 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 PIGCQ92535 297 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 APOBEC3DQ96AK3 386 aaPredicted RBP3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 RPUSD4Q96CM3 377 aaKnown RBP3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 WDYHV1Q96HA8 205 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 LOXL4Q96JB6 756 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 ALKBH3Q96Q83 286 aaPredicted RBP3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 GPHA2Q96T91 129 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 LINC00470Q9BZP3 86 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 OR51B6Q9H340 312 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 SLC25A22Q9H936 323 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 GPR35Q9HC97 309 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 KCNIP2Q9NS61 270 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 CBLN4Q9NTU7 201 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 MTCH1Q9NZJ7 389 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 RARRES3Q9UL19 164 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 CHD7Q9P2D1 2997 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 MYO7AQ13402 2215 aa3.94□□□□□ -1.78
SMARCC1-206ENST00000485737 ALPK2Q86TB3 2170 aa3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 IGHV1-45A0A0A0MS14 117 aa3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 SLC33A1O00400 549 aaPredicted RBP3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 CBR3O75828 277 aa3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 SYNGR4O95473 234 aa3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 HPRT1P00492 218 aa3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 IL6RP08887 468 aaPredicted RBP3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 NPPCP23582 126 aa3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 OR3A1P47881 315 aa3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 SSR4P51571 173 aa3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 SOX8P57073 446 aa3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 TPPP2P59282 170 aa3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 MRPS11P82912 194 aaKnown RBP3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 TRIP6Q15654 476 aaKnown RBP3.93□□□□□ -1.78
SMARCC1-206ENST00000485737 TMEM183BQ1AE95 376 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms