RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 GGTLC1Q9BX51 225 aa8.14□□□□□ -1.11
SMARCC1-205ENST00000483847 SELENOIQ9C0D9 397 aa8.14□□□□□ -1.11
SMARCC1-205ENST00000483847 IMPAD1Q9NX62 359 aa8.14□□□□□ -1.11
SMARCC1-205ENST00000483847 ERVK13-1Q9NX77 482 aa8.14□□□□□ -1.11
SMARCC1-205ENST00000483847 PIPOXQ9P0Z9 390 aa8.14□□□□□ -1.11
SMARCC1-205ENST00000483847 PEMTQ9UBM1 199 aa8.14□□□□□ -1.11
SMARCC1-205ENST00000483847 KLK5Q9Y337 293 aaPredicted RBP8.14□□□□□ -1.11
SMARCC1-205ENST00000483847 GMPPBQ9Y5P6 360 aa8.14□□□□□ -1.11
SMARCC1-205ENST00000483847 BMPR1BO00238 502 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 FUT3P21217 361 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 GBX2P52951 348 aaPredicted RBP8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 SNRPGP62308 76 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 PRR20EP86478 221 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 PRR20CP86479 221 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 PRR20DP86480 221 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 PRR20BP86481 221 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 PRR20AP86496 221 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 TNFRSF9Q07011 255 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 RIPK1Q13546 671 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 HMGN3Q15651 99 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 SLC25A30Q5SVS4 291 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 GLIPR1L1Q6UWM5 242 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 OR13C5Q8NGS8 318 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 DYNLRB2Q8TF09 96 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 TRUB1Q8WWH5 349 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 SNAPC3Q92966 411 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 TSNAXQ99598 290 aaKnown RBP8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 RNF5Q99942 180 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 ZC4H2Q9NQZ6 224 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 COA4Q9NYJ1 87 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 STEAP1Q9UHE8 339 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 DNAH2Q9P225 4427 aa8.13□□□□□ -1.11
SMARCC1-205ENST00000483847 TRAV8-7A0A075B6U6 113 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 MSGN1A6NI15 193 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 FAM90A23PA8MXZ1 464 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 AIREO43918 545 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 GPX5O75715 221 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 SPDEFO95238 335 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 FOLR2P14207 255 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 MGMTP16455 207 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 CPEP16870 476 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 IGFBP3P17936 291 aaPredicted RBP8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 KIR2DS2P43631 304 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 RPS16P62249 146 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 MRPL28Q13084 256 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 GPR176Q14439 515 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 C6orf141Q5SZD1 244 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 MEDAGQ5VYS4 303 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 ZNF383Q8NA42 475 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 CACNG8Q8WXS5 425 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 MRPL48Q96GC5 212 aaKnown RBP8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 Q96M66 194 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 OR14A2Q96R54 314 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 AGMATQ9BSE5 352 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 AMBNQ9NP70 447 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 OAZ3Q9UMX2 235 aa8.12□□□□□ -1.11
SMARCC1-205ENST00000483847 DNAH17Q9UFH2 4485 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 DYNC1H1Q14204 4646 aaKnown RBP8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 LOC102724200A0A096LPH7 203 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 A0A0B4J203 849 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 C2orf70A6NJV1 201 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 FAM90A7PA6NKC0 464 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 PDCD6O75340 191 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 IGLV2-23P01705 113 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 GLAP06280 429 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 FASP25445 335 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 LGALS7P47929 136 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 WFDC3Q8IUB2 231 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 PHLDA1Q8WV24 401 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 SULT4A1Q9BR01 284 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 AKIP1Q9NQ31 210 aa8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 ZNF230Q9UIE0 474 aaPredicted RBP8.11□□□□□ -1.11
SMARCC1-205ENST00000483847 SAC3D1A6NKF1 404 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 GYG2O15488 501 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 CRTAPO75718 401 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 NDUFB8O95169 186 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 HLA-AP01891 365 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 PRH1P02810 166 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 CRYGBP07316 175 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 LIMS3P0CW19 117 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 LIMS4P0CW20 117 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 GABRB1P18505 474 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 EXOSC2Q13868 293 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 MRGPRG-AS1Q2M3A8 158 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 DEFB135Q30KP9 77 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 AWAT2Q6E213 333 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 RPL22L1Q6P5R6 122 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 SLC16A13Q7RTY0 426 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 TMEM61Q8N0U2 210 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 SVOPQ8N4V2 548 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 JAGN1Q8N5M9 183 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 ADAD2Q8NCV1 583 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 OR52I1Q8NGK6 324 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 KCNG3Q8TAE7 436 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 FAM46BQ96A09 425 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 FAAP24Q9BTP7 215 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 C11orf54Q9H0W9 315 aaPredicted RBP8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 ABRACLQ9P1F3 81 aa8.1□□□□□ -1.11
SMARCC1-205ENST00000483847 OR1A1Q9P1Q5 309 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms