RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 FAM25GB3EWG6 89 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 J3QRK9 145 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 FGF16O43320 207 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 PROP1O75360 226 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 CT45A6P0DMU7 189 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 CT45A5P0DMU8 189 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 CT45A7P0DMV0 189 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 NFYAP23511 347 aaPredicted RBP9.59□□□□□ -0.87
CCM2-212ENST00000480382 CBX5P45973 191 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 HIST2H2BDQ6DRA6 164 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 Q8N9W7 124 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 DRAXINQ8NBI3 349 aaPredicted RBP9.59□□□□□ -0.87
CCM2-212ENST00000480382 DYNC2LI1Q8TCX1 351 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 SNAPC3Q92966 411 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 GHITMQ9H3K2 345 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 CCDC59Q9P031 241 aaKnown RBP9.59□□□□□ -0.87
CCM2-212ENST00000480382 CEPT1Q9Y6K0 416 aa9.59□□□□□ -0.87
CCM2-212ENST00000480382 TET2Q6N021 2002 aaPredicted RBP9.58□□□□□ -0.88
CCM2-212ENST00000480382 SMIM31A0A1B0GVY4 71 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 CCDC160A6NGH7 325 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 OR5H14A6NHG9 310 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 H0YJW9 148 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 M0R1X1 148 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 PEX14O75381 377 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 HLA-DQB1P01920 261 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 CTXN2P0C2S0 81 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 CNTFRP26992 372 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 F2RL1P55085 397 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 LINC00205P59089 165 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 ACTBP60709 375 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 MMDQ15546 238 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 SNX29P2Q8IUI4 249 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 LAX1Q8IWV1 398 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 C11orf44Q8N8P7 122 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.58□□□□□ -0.88
CCM2-212ENST00000480382 WNT10AQ9GZT5 417 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 PLSCR3Q9NRY6 295 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 SDHAF2Q9NX18 166 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 EXTL2Q9UBQ6 330 aa9.58□□□□□ -0.88
CCM2-212ENST00000480382 MRPS7Q9Y2R9 242 aaKnown RBP9.58□□□□□ -0.88
CCM2-212ENST00000480382 IGKV1D-13A0A0B4J2D9 117 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 H7C2Y5 167 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 RGS5O15539 181 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 IGKV1-13P0DP09 117 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 PRSS3P35030 304 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 RNASE12Q5GAN4 147 aaKnown RBP9.57□□□□□ -0.88
CCM2-212ENST00000480382 FAM71E2Q8N5Q1 922 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 ZNF383Q8NA42 475 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 OR8H1Q8NGG4 311 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 OR5AN1Q8NGI8 311 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 RITA1Q96K30 269 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 RBM38Q9H0Z9 239 aaKnown RBP9.57□□□□□ -0.88
CCM2-212ENST00000480382 MIXL1Q9H2W2 232 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 LIN7CQ9NUP9 197 aaKnown RBP9.57□□□□□ -0.88
CCM2-212ENST00000480382 NECAP2Q9NVZ3 263 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 ANAPC10Q9UM13 185 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 WASHC3Q9Y3C0 194 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 OR2W1Q9Y3N9 320 aa9.57□□□□□ -0.88
CCM2-212ENST00000480382 TRRAPQ9Y4A5 3859 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 CTDSP2O14595 271 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 NBR2O15453 112 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 TUSC2O75896 110 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 APOA2P02652 100 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 LUMP51884 338 aaPredicted RBP9.56□□□□□ -0.88
CCM2-212ENST00000480382 CDK10Q15131 360 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 ZNF645Q8N7E2 425 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 OR5AP2Q8NGF4 316 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 GPX8Q8TED1 209 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 WIPF2Q8TF74 440 aaPredicted RBP9.56□□□□□ -0.88
CCM2-212ENST00000480382 RASL11BQ9BPW5 248 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 ADAM30Q9UKF2 790 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 GAB2Q9UQC2 676 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 PKD1L1Q8TDX9 2849 aa9.56□□□□□ -0.88
CCM2-212ENST00000480382 VWFP04275 2813 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 FBXO24O75426 580 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 NDUFA3O95167 84 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 IGKV1-16P04430 117 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 OR5H8P0DN80 308 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 CD28P10747 220 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 AADACP22760 399 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 FCGR2CP31995 323 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 MC5RP33032 325 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 SLC35E3Q7Z769 313 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 PDPNQ86YL7 162 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 NOL4LQ96MY1 436 aaPredicted RBP9.55□□□□□ -0.88
CCM2-212ENST00000480382 HSPB9Q9BQS6 159 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 SLIRPQ9GZT3 109 aaKnown RBP9.55□□□□□ -0.88
CCM2-212ENST00000480382 C6orf62Q9GZU0 229 aaPredicted RBP9.55□□□□□ -0.88
CCM2-212ENST00000480382 SCPEP1Q9HB40 452 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 SLC35D1Q9NTN3 355 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 EHFQ9NZC4 300 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 LINC00527Q9UJ94 153 aa9.55□□□□□ -0.88
CCM2-212ENST00000480382 LINC01548A6NM66 108 aa9.54□□□□□ -0.88
CCM2-212ENST00000480382 LINC00473A8K010 186 aa9.54□□□□□ -0.88
CCM2-212ENST00000480382 RBBP9O75884 186 aa9.54□□□□□ -0.88
CCM2-212ENST00000480382 PPYP01298 95 aa9.54□□□□□ -0.88
CCM2-212ENST00000480382 IGLV2-14P01704 120 aa9.54□□□□□ -0.88
CCM2-212ENST00000480382 IGHG2P01859 326 aa9.54□□□□□ -0.88
CCM2-212ENST00000480382 PMP2P02689 132 aa9.54□□□□□ -0.88
CCM2-212ENST00000480382 NAT1P18440 290 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms