RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 IGHV3-23P01764 117 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 EPHA2P29317 976 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 MC5RP33032 325 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 HMGA2P52926 109 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 RPS27AP62979 156 aaKnown RBP8.46□□□□□ -1.06
USP11-208ENST00000480104 PPP1R8Q12972 351 aaKnown RBP8.46□□□□□ -1.06
USP11-208ENST00000480104 FAM209BQ5JX69 171 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 SLC25A30Q5SVS4 291 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 C6orf183Q5T699 404 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 PRSS35Q8N3Z0 413 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 NECAP1Q8NC96 275 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 OR5AN1Q8NGI8 311 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 OR4K15Q8NH41 348 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 MCUR1Q96AQ8 359 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 YTHDF1Q9BYJ9 559 aaKnown RBP8.46□□□□□ -1.06
USP11-208ENST00000480104 IFT22Q9H7X7 185 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 PTTG2Q9NZH5 202 aa8.46□□□□□ -1.06
USP11-208ENST00000480104 EXOSC1Q9Y3B2 195 aaKnown RBP8.46□□□□□ -1.06
USP11-208ENST00000480104 FAT4Q6V0I7 4981 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 FAM90A7PA6NKC0 464 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 C15orf61A6NNL5 157 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 F8W735 103 aaPredicted RBP8.45□□□□□ -1.06
USP11-208ENST00000480104 SNX3O60493 162 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 KRT36O76013 467 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 UBCP0CG48 685 aaKnown RBP8.45□□□□□ -1.06
USP11-208ENST00000480104 CPEP16870 476 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 RCC1P18754 421 aaPredicted RBP8.45□□□□□ -1.06
USP11-208ENST00000480104 CRISP1P54107 249 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 FAM3BP58499 235 aaPredicted RBP8.45□□□□□ -1.06
USP11-208ENST00000480104 HAMPP81172 84 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 HTD2P86397 168 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 KISS1Q15726 138 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 GLYATQ6IB77 296 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 SSX6Q7RTT6 188 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 SLC35F2Q8IXU6 374 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 OR2AK2Q8NG84 335 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 MRPL27Q9P0M9 148 aaKnown RBP8.45□□□□□ -1.06
USP11-208ENST00000480104 JPT1Q9UK76 154 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 X6R8D5 127 aa8.45□□□□□ -1.06
USP11-208ENST00000480104 GEMIN2O14893 280 aaKnown RBP8.44□□□□□ -1.06
USP11-208ENST00000480104 ST8SIA5O15466 376 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 BTF3P20290 206 aaKnown RBP8.44□□□□□ -1.06
USP11-208ENST00000480104 RBM11P57052 281 aaKnown RBP8.44□□□□□ -1.06
USP11-208ENST00000480104 GINS1Q14691 196 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 MAPRE2Q15555 327 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 ATAD3CQ5T2N8 411 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 ZNF691Q5VV52 312 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 LPCAT4Q643R3 524 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 DMKNQ6E0U4 476 aaPredicted RBP8.44□□□□□ -1.06
USP11-208ENST00000480104 CLEC19AQ6UXS0 136 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 STX19Q8N4C7 294 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 FAM210BQ96KR6 192 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 NIPSNAP1Q9BPW8 284 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 TAF9BQ9HBM6 251 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 ST3GAL6Q9Y274 331 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 S4R3C0 116 aa8.44□□□□□ -1.06
USP11-208ENST00000480104 ZNF705EA8MWA4 302 aaPredicted RBP8.43□□□□□ -1.06
USP11-208ENST00000480104 ZNF670-ZNF695F2Z2N8 137 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 MPPED1O15442 326 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 KRT8P05787 483 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 NPY1RP25929 384 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 ELLP55199 621 aaPredicted RBP8.43□□□□□ -1.06
USP11-208ENST00000480104 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 MAGOHP61326 146 aaKnown RBP8.43□□□□□ -1.06
USP11-208ENST00000480104 ICAM4Q14773 271 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 RSU1Q15404 277 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 LAMTOR1Q6IAA8 161 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 PXT1Q8NFP0 134 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 ZNRF2Q8NHG8 242 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 TMED3Q9Y3Q3 217 aa8.43□□□□□ -1.06
USP11-208ENST00000480104 A0A0G2JND7 137 aa8.42□□□□□ -1.06
USP11-208ENST00000480104 RAB29O14966 203 aa8.42□□□□□ -1.06
USP11-208ENST00000480104 YPEL1O60688 119 aa8.42□□□□□ -1.06
USP11-208ENST00000480104 IGLV2-23P01705 113 aa8.42□□□□□ -1.06
USP11-208ENST00000480104 GIG44P09565 113 aaPredicted RBP8.42□□□□□ -1.06
USP11-208ENST00000480104 PRB4P10163 310 aaPredicted RBP8.42□□□□□ -1.06
USP11-208ENST00000480104 CD300LDQ6UXZ3 194 aa8.42□□□□□ -1.06
USP11-208ENST00000480104 DRAXINQ8NBI3 349 aaPredicted RBP8.42□□□□□ -1.06
USP11-208ENST00000480104 TNFAIP8L1Q8WVP5 186 aa8.42□□□□□ -1.06
USP11-208ENST00000480104 YPEL2Q96QA6 119 aa8.42□□□□□ -1.06
USP11-208ENST00000480104 PIPOXQ9P0Z9 390 aa8.42□□□□□ -1.06
USP11-208ENST00000480104 UFC1Q9Y3C8 167 aa8.42□□□□□ -1.06
USP11-208ENST00000480104 IGHV3-35A0A0C4DH35 117 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 A0A1B0GW64 132 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 MAS1P04201 325 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 HMGN1P05114 100 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 CRYGBP07316 175 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 MYOD1P15172 320 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 GALP22466 123 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 DLK1P80370 383 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 NHLRC3Q5JS37 347 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 TRAT1Q6PIZ9 186 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 C19orf35Q6ZS72 473 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 C15orf53Q8NAA6 179 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 OR51A4Q8NGJ6 313 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 TBX5Q99593 518 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 FAM192AQ9GZU8 254 aa8.41□□□□□ -1.06
USP11-208ENST00000480104 GABRPO00591 440 aa8.4□□□□□ -1.06
USP11-208ENST00000480104 ARPC2O15144 300 aa8.4□□□□□ -1.06
USP11-208ENST00000480104 CTSDP07339 412 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms