RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 C5orf66Q9H5L9 145 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 OR2S2Q9NQN1 319 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 GNG12Q9UBI6 72 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 ZNF221Q9UK13 617 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 GPR132Q9UNW8 380 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 OR2W1Q9Y3N9 320 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 SONP18583 2426 aaKnown RBP5.44□□□□□ -1.54
USP48-208ENST00000479177 OTOGQ6ZRI0 2925 aa5.44□□□□□ -1.54
USP48-208ENST00000479177 MTORP42345 2549 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 CSMD1Q96PZ7 3565 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 AKAP9Q99996 3911 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 hCG_2014768A0A024R1R8 64 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 PPIAL4CA0A0B4J2A2 164 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 IGHV2-70DA0A0C4DH43 119 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 A0A1W2PPH5 198 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 C7orf66A4D0T2 115 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 FAM157AC9JC47 383 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 M0R1W7 72 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 ITGB1BP1O14713 200 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 SLC31A2O15432 143 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 ENSAO43768 121 aaKnown RBP5.43□□□□□ -1.54
USP48-208ENST00000479177 YPEL1O60688 119 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 PRAF2O60831 178 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 RGS11O94810 467 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 SLPIP03973 132 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 IL5P05113 134 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 LIPFP07098 398 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 PPIAL4GP0DN37 164 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 CEACAM6P40199 344 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 LUMP51884 338 aaPredicted RBP5.43□□□□□ -1.54
USP48-208ENST00000479177 TAS2R31P59538 309 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 UBE2MP61081 183 aaKnown RBP5.43□□□□□ -1.54
USP48-208ENST00000479177 RND3P61587 244 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 LCN2P80188 198 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 CD69Q07108 199 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 Q3ZCU0 254 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 MORN2Q502X0 79 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 CT83Q5H943 113 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 LY6G6FQ5SQ64 297 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 PRSS57Q6UWY2 283 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 SLC25A42Q86VD7 318 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 SLC38A6Q8IZM9 456 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 C11orf42Q8N5U0 333 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 ADAD2Q8NCV1 583 aaKnown RBP5.43□□□□□ -1.54
USP48-208ENST00000479177 ZNF439Q8NDP4 499 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 ZFAND1Q8TCF1 268 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 SECTM1Q8WVN6 248 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 LEAP2Q969E1 77 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 TMEM230Q96A57 120 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 C5orf30Q96GV9 206 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 SCGB3A2Q96PL1 93 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 YPEL2Q96QA6 119 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 SEC22CQ9BRL7 303 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 RTBDNQ9BSG5 229 aaPredicted RBP5.43□□□□□ -1.54
USP48-208ENST00000479177 BEX2Q9BXY8 128 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 SLC5A7Q9GZV3 580 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 ALX4Q9H161 411 aaPredicted RBP5.43□□□□□ -1.54
USP48-208ENST00000479177 IFI27L2Q9H2X8 130 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 BEX1Q9HBH7 125 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 ONECUT1Q9UBC0 465 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 C14orf166Q9Y224 244 aaKnown RBP5.43□□□□□ -1.54
USP48-208ENST00000479177 ALG5Q9Y673 324 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 SESN1Q9Y6P5 492 aa5.43□□□□□ -1.54
USP48-208ENST00000479177 A0A087X0M5 115 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 A0A1B0GX30 115 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 GPR31O00270 319 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 FOXH1O75593 365 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 DHFRP00374 187 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 IGLV2-14P01704 120 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 OR8U9P0C7N5 309 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 IGHV1-8P0DP01 117 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 USF1P22415 310 aaPredicted RBP5.42□□□□□ -1.54
USP48-208ENST00000479177 NFYBP25208 207 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 CD34P28906 385 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 GNRHRP30968 328 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 GNG10P50151 68 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 PPP1R1AQ13522 171 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 MSMO1Q15800 293 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 PHLDA2Q53GA4 152 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 LPCAT3Q6P1A2 487 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 FAHD2BQ6P2I3 314 aaPredicted RBP5.42□□□□□ -1.54
USP48-208ENST00000479177 GLDNQ6ZMI3 551 aaPredicted RBP5.42□□□□□ -1.54
USP48-208ENST00000479177 ZNF818PQ6ZRF7 136 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 ZNF645Q8N7E2 425 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 Q8N7P7 452 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 C8orf31Q8N9H6 132 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 OR2AK2Q8NG84 335 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 OR8U1Q8NH10 309 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 CAPSLQ8WWF8 208 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 FAHD2AQ96GK7 314 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 ZNF486Q96H40 463 aaPredicted RBP5.42□□□□□ -1.54
USP48-208ENST00000479177 AGMATQ9BSE5 352 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 ABHD14AQ9BUJ0 271 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 SUCNR1Q9BXA5 334 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 OR2D2Q9H210 308 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 GHITMQ9H3K2 345 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 CCL28Q9NRJ3 127 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 SLC2A9Q9NRM0 540 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 KCNS2Q9ULS6 477 aa5.42□□□□□ -1.54
USP48-208ENST00000479177 PSG11Q9UQ72 335 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms