RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 HACD4Q5VWC8 232 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 METAP1DQ6UB28 335 aaPredicted RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 CASP12Q6UXS9 341 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 LINC01551Q86U37 167 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 FUNDC1Q8IVP5 155 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 NKAIN4Q8IVV8 208 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 SLC30A8Q8IWU4 369 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF321PQ8N8H1 164 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 OR5T3Q8NGG3 340 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 OR4A15Q8NGL6 344 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 OR5H6Q8NGV6 325 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 OR10A6Q8NH74 314 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 ACOT11Q8WXI4 607 aaPredicted RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 CIDECQ96AQ7 238 aaPredicted RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 COQ2Q96H96 371 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 OXGR1Q96P68 337 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 ERMAPQ96PL5 475 aaPredicted RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 TRIB3Q96RU7 358 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 NPY6RQ99463 290 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 KCNS3Q9BQ31 491 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 PELOQ9BRX2 385 aaKnown RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 HDHD3Q9BSH5 251 aaPredicted RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 MND1Q9BWT6 205 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 SLIRPQ9GZT3 109 aaKnown RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 NXF2Q9GZY0 626 aaKnown RBP3.07□□□□□ -1.92
CCDC171-207ENST00000478913 MED28Q9H204 178 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 TAS2R7Q9NYW3 318 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 SLC25A37Q9NYZ2 338 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 OPTCQ9UBM4 332 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 BAIAP2Q9UQB8 552 aa3.07□□□□□ -1.92
CCDC171-207ENST00000478913 LPAP08519 4548 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 TRAV26-1A0A087WT03 109 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 A0A096LPI6 279 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 A0A1B0GVI7 797 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 KRBOX1C9JBD0 128 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 C12orf77C9JDV5 145 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 I3L521 148 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 FXYD1O00168 92 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 TNFRSF11BO00300 401 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 RFXANKO14593 260 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 HSD17B6O14756 317 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 CHST10O43529 356 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 SNAI2O43623 268 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 SCN2BO60939 215 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 SS18L1O75177 396 aaPredicted RBP3.06□□□□□ -1.92
CCDC171-207ENST00000478913 RP2O75695 350 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 CCNB2O95067 398 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 KCNK2O95069 426 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 RPS17P08708 135 aaKnown RBP3.06□□□□□ -1.92
CCDC171-207ENST00000478913 CTRB1P17538 263 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 TBPP20226 339 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 GADD45AP24522 165 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 STOMP27105 288 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 PSMB5P28074 263 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 HAAOP46952 286 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 IDH2P48735 452 aaKnown RBP3.06□□□□□ -1.92
CCDC171-207ENST00000478913 MTPNP58546 118 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 S100A12P80511 92 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 HAMPP81172 84 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 PITPNAQ00169 270 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 IFITM2Q01629 132 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 EBI3Q14213 229 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 YIF1BQ5BJH7 314 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 TSPO2Q5TGU0 170 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 ANXA8L1Q5VT79 327 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 KHDRBS2Q5VWX1 349 aaKnown RBP3.06□□□□□ -1.92
CCDC171-207ENST00000478913 TBPL2Q6SJ96 375 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
CCDC171-207ENST00000478913 C6orf120Q7Z4R8 191 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 SNX20Q7Z614 316 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 CLDN22Q8N7P3 220 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 OR4F6Q8NGB9 312 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 OR10G9Q8NGN4 311 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 OR1J4Q8NGS1 313 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 FAM110BQ8TC76 370 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF431Q8TF32 576 aaPredicted RBP3.06□□□□□ -1.92
CCDC171-207ENST00000478913 ACOT12Q8WYK0 555 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 SLC7A6Q92536 515 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 GTF2H4Q92759 462 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 RERGQ96A58 199 aaPredicted RBP3.06□□□□□ -1.92
CCDC171-207ENST00000478913 SGK3Q96BR1 496 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 DIRAS2Q96HU8 199 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 KCTD7Q96MP8 289 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 COPS8Q99627 209 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 HDHD2Q9H0R4 259 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 OR52A5Q9H2C5 316 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 PIGUQ9H490 435 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 ELOVL6Q9H5J4 265 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 CACYBPQ9HB71 228 aaKnown RBP3.06□□□□□ -1.92
CCDC171-207ENST00000478913 PATZ1Q9HBE1 687 aaKnown RBP3.06□□□□□ -1.92
CCDC171-207ENST00000478913 TREX1Q9NSU2 369 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 GLTPQ9NZD2 209 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 EMC3Q9P0I2 261 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 COPZ2Q9P299 210 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 KCNIP3Q9Y2W7 256 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 POLR3HQ9Y535 204 aaPredicted RBP3.06□□□□□ -1.92
CCDC171-207ENST00000478913 HSPB11Q9Y547 144 aa3.06□□□□□ -1.92
CCDC171-207ENST00000478913 TSSC4Q9Y5U2 329 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms