RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 LYSMD2Q8IV50 215 aa21.41■■□□□ 1.02
CCM2-211ENST00000478582 SGMS2Q8NHU3 365 aa21.41■■□□□ 1.02
CCM2-211ENST00000478582 SOSTQ9BQB4 213 aa21.41■■□□□ 1.02
CCM2-211ENST00000478582 MRPL20Q9BYC9 149 aaKnown RBP21.41■■□□□ 1.02
CCM2-211ENST00000478582 RANBP3Q9H6Z4 567 aaPredicted RBP21.41■■□□□ 1.02
CCM2-211ENST00000478582 IGHV3-72A0A0B4J1Y9 119 aa21.4■■□□□ 1.02
CCM2-211ENST00000478582 IGKV1D-33P01593 117 aa21.4■■□□□ 1.02
CCM2-211ENST00000478582 IGKV1-33P01594 117 aa21.4■■□□□ 1.02
CCM2-211ENST00000478582 OR5H8P0DN80 308 aa21.4■■□□□ 1.02
CCM2-211ENST00000478582 TAS2R46P59540 309 aa21.4■■□□□ 1.02
CCM2-211ENST00000478582 Q6ZSV7 163 aa21.4■■□□□ 1.02
CCM2-211ENST00000478582 OVCH2Q7RTZ1 564 aa21.4■■□□□ 1.02
CCM2-211ENST00000478582 OR4F5Q8NH21 305 aa21.4■■□□□ 1.02
CCM2-211ENST00000478582 AKR1E2Q96JD6 320 aa21.4■■□□□ 1.02
CCM2-211ENST00000478582 OR2D2Q9H210 308 aa21.4■■□□□ 1.02
CCM2-211ENST00000478582 A6NHS1 94 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 ZNF736B4DX44 427 aaPredicted RBP21.39■■□□□ 1.01
CCM2-211ENST00000478582 CTDSPLO15194 276 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 CT45A6P0DMU7 189 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 CT45A5P0DMU8 189 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 CT45A7P0DMV0 189 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 LUMP51884 338 aaPredicted RBP21.39■■□□□ 1.01
CCM2-211ENST00000478582 RAG2P55895 527 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 Q8N6K4 173 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 OR2T10Q8NGZ9 312 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 OR52I2Q8NH67 350 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 GIMAP1Q8WWP7 306 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 FCAMRQ8WWV6 532 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 EAF1Q96JC9 268 aaPredicted RBP21.39■■□□□ 1.01
CCM2-211ENST00000478582 SLC25A33Q9BSK2 321 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 NPFFR1Q9GZQ6 430 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 C16orf95Q9H693 158 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 BEX1Q9HBH7 125 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 MTFP1Q9UDX5 166 aa21.39■■□□□ 1.01
CCM2-211ENST00000478582 RBM7Q9Y580 266 aaKnown RBP21.39■■□□□ 1.01
CCM2-211ENST00000478582 GABARAPH6UMI1 98 aa21.38■■□□□ 1.01
CCM2-211ENST00000478582 TMEM11P17152 192 aa21.38■■□□□ 1.01
CCM2-211ENST00000478582 FCGR2CP31995 323 aa21.38■■□□□ 1.01
CCM2-211ENST00000478582 S100A5P33763 92 aa21.38■■□□□ 1.01
CCM2-211ENST00000478582 IL18Q14116 193 aa21.38■■□□□ 1.01
CCM2-211ENST00000478582 HES1Q14469 280 aa21.38■■□□□ 1.01
CCM2-211ENST00000478582 SDHAF2Q9NX18 166 aa21.38■■□□□ 1.01
CCM2-211ENST00000478582 KLK11Q9UBX7 282 aa21.38■■□□□ 1.01
CCM2-211ENST00000478582 RBBP9O75884 186 aa21.37■■□□□ 1.01
CCM2-211ENST00000478582 SLC22A5O76082 557 aa21.37■■□□□ 1.01
CCM2-211ENST00000478582 MOSP00540 346 aa21.37■■□□□ 1.01
CCM2-211ENST00000478582 ACTBP60709 375 aa21.37■■□□□ 1.01
CCM2-211ENST00000478582 SSBP1Q04837 148 aaKnown RBP21.37■■□□□ 1.01
CCM2-211ENST00000478582 DYRK1AQ13627 763 aa21.37■■□□□ 1.01
CCM2-211ENST00000478582 DHRS11Q6UWP2 260 aa21.37■■□□□ 1.01
CCM2-211ENST00000478582 OR5H2Q8NGV7 314 aa21.37■■□□□ 1.01
CCM2-211ENST00000478582 FABP12A6NFH5 140 aa21.36■■□□□ 1.01
CCM2-211ENST00000478582 OR5H14A6NHG9 310 aa21.36■■□□□ 1.01
CCM2-211ENST00000478582 M0QZK8 103 aa21.36■■□□□ 1.01
CCM2-211ENST00000478582 HLA-DMAP28067 261 aa21.36■■□□□ 1.01
CCM2-211ENST00000478582 MC5RP33032 325 aa21.36■■□□□ 1.01
CCM2-211ENST00000478582 RFX2P48378 723 aa21.36■■□□□ 1.01
CCM2-211ENST00000478582 OR5AN1Q8NGI8 311 aa21.36■■□□□ 1.01
CCM2-211ENST00000478582 OR4C13Q8NGP0 309 aa21.36■■□□□ 1.01
CCM2-211ENST00000478582 SMIM4Q8WVI0 70 aa21.36■■□□□ 1.01
CCM2-211ENST00000478582 EHFQ9NZC4 300 aa21.36■■□□□ 1.01
CCM2-211ENST00000478582 IGKV1D-13A0A0B4J2D9 117 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 PMP2P02689 132 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 IGKV1-13P0DP09 117 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 AADACP22760 399 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 HRH1P35367 487 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 DGCR2P98153 550 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 HNF4GQ14541 408 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 ZNF660Q6AZW8 331 aaPredicted RBP21.35■■□□□ 1.01
CCM2-211ENST00000478582 Q8N2B8 174 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 ZNF645Q8N7E2 425 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 C5orf30Q96GV9 206 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 MOB4Q9Y3A3 225 aa21.35■■□□□ 1.01
CCM2-211ENST00000478582 CLPSL1A2RUU4 121 aa21.34■■□□□ 1.01
CCM2-211ENST00000478582 H0YJW9 148 aa21.34■■□□□ 1.01
CCM2-211ENST00000478582 M0R1X1 148 aa21.34■■□□□ 1.01
CCM2-211ENST00000478582 PPYP01298 95 aa21.34■■□□□ 1.01
CCM2-211ENST00000478582 RNASE12Q5GAN4 147 aaKnown RBP21.34■■□□□ 1.01
CCM2-211ENST00000478582 CCDC190Q86UF4 302 aa21.34■■□□□ 1.01
CCM2-211ENST00000478582 OR8H1Q8NGG4 311 aa21.34■■□□□ 1.01
CCM2-211ENST00000478582 LINC01006Q8NI28 216 aa21.34■■□□□ 1.01
CCM2-211ENST00000478582 ZNF107Q9UII5 783 aaPredicted RBP21.34■■□□□ 1.01
CCM2-211ENST00000478582 J3QRK9 145 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 FGF16O43320 207 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 GSTZ1O43708 216 aaPredicted RBP21.33■■□□□ 1.01
CCM2-211ENST00000478582 AMY1AP04745 511 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 AMY2AP04746 511 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 BLCAPP62952 87 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 MSMO1Q15800 293 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 ACTBL2Q562R1 376 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 ZNF383Q8NA42 475 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 DRAXINQ8NBI3 349 aaPredicted RBP21.33■■□□□ 1.01
CCM2-211ENST00000478582 OR6Q1Q8NGQ2 317 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 PRSS22Q9GZN4 317 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 ZNF702PQ9H963 129 aa21.33■■□□□ 1.01
CCM2-211ENST00000478582 RBMX2Q9Y388 322 aaKnown RBP21.33■■□□□ 1.01
CCM2-211ENST00000478582 IGLV2-14P01704 120 aa21.32■■□□□ 1
CCM2-211ENST00000478582 TBPP20226 339 aa21.32■■□□□ 1
CCM2-211ENST00000478582 PTBP1P26599 531 aaKnown RBP eCLIP21.32■■□□□ 19e-9■■■■■ 35.7
CCM2-211ENST00000478582 TAGLNQ01995 201 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms