RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ZMYND19Q96E35 227 aaPredicted RBP0.01□□□□□ -2.41
HPS3-205ENST00000478525 TBX5Q99593 518 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 BPIFA3Q9BQP9 254 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 UGT2B28Q9BY64 529 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 NAA50Q9GZZ1 169 aaKnown RBP0.01□□□□□ -2.41
HPS3-205ENST00000478525 C10orf95Q9H7T3 257 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 XAGE1AQ9HD64 81 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 DMAC2Q9NW81 257 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 LINC00527Q9UJ94 153 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 V9GYY9 64 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 ABCB11O95342 1321 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 NUP160Q12769 1436 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 GLI3P10071 1580 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 FRAS1Q86XX4 4008 aa0.01□□□□□ -2.41
HPS3-205ENST00000478525 TRAV14DV4A0A0A6YYC5 116 aa0□□□□□ -2.41
HPS3-205ENST00000478525 IGHV1-18A0A0C4DH31 117 aa0□□□□□ -2.41
HPS3-205ENST00000478525 GSTTP1A0A1W2PQM5 241 aa0□□□□□ -2.41
HPS3-205ENST00000478525 MEIS3P1A6NDR6 274 aa0□□□□□ -2.41
HPS3-205ENST00000478525 OR2AG2A6NM03 316 aa0□□□□□ -2.41
HPS3-205ENST00000478525 OR11H12B2RN74 326 aa0□□□□□ -2.41
HPS3-205ENST00000478525 H7C2G1 150 aa0□□□□□ -2.41
HPS3-205ENST00000478525 GOLGA8RI6L899 631 aa0□□□□□ -2.41
HPS3-205ENST00000478525 RFXANKO14593 260 aa0□□□□□ -2.41
HPS3-205ENST00000478525 GSTZ1O43708 216 aaPredicted RBP0□□□□□ -2.41
HPS3-205ENST00000478525 ORC5O43913 435 aa0□□□□□ -2.41
HPS3-205ENST00000478525 NEMFO60524 1076 aa0□□□□□ -2.41
HPS3-205ENST00000478525 CIAO1O76071 339 aa0□□□□□ -2.41
HPS3-205ENST00000478525 SNX4O95219 450 aa0□□□□□ -2.41
HPS3-205ENST00000478525 MSMBP08118 114 aa0□□□□□ -2.41
HPS3-205ENST00000478525 GALP22466 123 aa0□□□□□ -2.41
HPS3-205ENST00000478525 DEKP35659 375 aaKnown RBP0□□□□□ -2.41
HPS3-205ENST00000478525 IFNGR2P38484 337 aa0□□□□□ -2.41
HPS3-205ENST00000478525 CA7P43166 264 aa0□□□□□ -2.41
HPS3-205ENST00000478525 SMARCA4P51532 1647 aa0□□□□□ -2.41
HPS3-205ENST00000478525 RBM11P57052 281 aaKnown RBP0□□□□□ -2.41
HPS3-205ENST00000478525 FXYD6P3P58550 94 aa0□□□□□ -2.41
HPS3-205ENST00000478525 DAOAP59103 153 aa0□□□□□ -2.41
HPS3-205ENST00000478525 TPI1P60174 286 aa0□□□□□ -2.41
HPS3-205ENST00000478525 RUNX1Q01196 453 aa0□□□□□ -2.41
HPS3-205ENST00000478525 CD164Q04900 197 aa0□□□□□ -2.41
HPS3-205ENST00000478525 BSPH1Q075Z2 132 aa0□□□□□ -2.41
HPS3-205ENST00000478525 DYNC1I2Q13409 638 aaKnown RBP0□□□□□ -2.41
HPS3-205ENST00000478525 VAMP3Q15836 100 aa0□□□□□ -2.41
HPS3-205ENST00000478525 MIAQ16674 131 aa0□□□□□ -2.41
HPS3-205ENST00000478525 CLEC12BQ2HXU8 276 aa0□□□□□ -2.41
HPS3-205ENST00000478525 TTC33Q6PID6 262 aaPredicted RBP0□□□□□ -2.41
HPS3-205ENST00000478525 EPGNQ6UW88 154 aa0□□□□□ -2.41
HPS3-205ENST00000478525 MRPL52Q86TS9 123 aaKnown RBP0□□□□□ -2.41
HPS3-205ENST00000478525 LINC00523Q86TU6 105 aa0□□□□□ -2.41
HPS3-205ENST00000478525 Q8N2B8 174 aa0□□□□□ -2.41
HPS3-205ENST00000478525 UMODL1-AS1Q8N2C9 162 aa0□□□□□ -2.41
HPS3-205ENST00000478525 ATPAF2Q8N5M1 289 aa0□□□□□ -2.41
HPS3-205ENST00000478525 ADAMTSL1Q8N6G6 1762 aa0□□□□□ -2.41
HPS3-205ENST00000478525 NATD1Q8N6N6 113 aa0□□□□□ -2.41
HPS3-205ENST00000478525 GPATCH11Q8N954 259 aa0□□□□□ -2.41
HPS3-205ENST00000478525 ZNF565Q8N9K5 539 aa0□□□□□ -2.41
HPS3-205ENST00000478525 CCDC112Q8NEF3 446 aa0□□□□□ -2.41
HPS3-205ENST00000478525 OR5D18Q8NGL1 313 aa0□□□□□ -2.41
HPS3-205ENST00000478525 OR4P4Q8NGL7 312 aa0□□□□□ -2.41
HPS3-205ENST00000478525 OR11H2Q8NH07 326 aa0□□□□□ -2.41
HPS3-205ENST00000478525 CLDND2Q8NHS1 167 aa0□□□□□ -2.41
HPS3-205ENST00000478525 CLHC1Q8NHS4 586 aa0□□□□□ -2.41
HPS3-205ENST00000478525 CEP192Q8TEP8 1941 aa0□□□□□ -2.41
HPS3-205ENST00000478525 TMEM239Q8WW34 195 aa0□□□□□ -2.41
HPS3-205ENST00000478525 MS4A6EQ96DS6 147 aa0□□□□□ -2.41
HPS3-205ENST00000478525 CPNE2Q96FN4 548 aaPredicted RBP0□□□□□ -2.41
HPS3-205ENST00000478525 ZNF396Q96N95 335 aaPredicted RBP0□□□□□ -2.41
HPS3-205ENST00000478525 TRNT1Q96Q11 434 aaKnown RBP0□□□□□ -2.41
HPS3-205ENST00000478525 AMELYQ99218 206 aa0□□□□□ -2.41
HPS3-205ENST00000478525 PRSS27Q9BQR3 290 aa0□□□□□ -2.41
HPS3-205ENST00000478525 TSSK6Q9BXA6 273 aa0□□□□□ -2.41
HPS3-205ENST00000478525 SYT4Q9H2B2 425 aa0□□□□□ -2.41
HPS3-205ENST00000478525 RGCCQ9H4X1 137 aa0□□□□□ -2.41
HPS3-205ENST00000478525 CD300AQ9UGN4 299 aa0□□□□□ -2.41
HPS3-205ENST00000478525 TBL2Q9Y4P3 447 aaKnown RBP0□□□□□ -2.41
HPS3-205ENST00000478525 IGSF10Q6WRI0 2623 aa-0□□□□□ -2.41
HPS3-205ENST00000478525 DMBT1Q9UGM3 2413 aaPredicted RBP-0.01□□□□□ -2.41
HPS3-205ENST00000478525 NAV3Q8IVL0 2385 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 ASCC3Q8N3C0 2202 aaKnown RBP-0.01□□□□□ -2.41
HPS3-205ENST00000478525 MYO18AQ92614 2054 aaKnown RBP-0.01□□□□□ -2.41
HPS3-205ENST00000478525 CHD5Q8TDI0 1954 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 MEGF8Q7Z7M0 2845 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 LOC110117498A0A087WWA1 95 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 IGKV1-12A0A0C4DH73 117 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 C9J4A7 227 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 COPEO14579 308 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 SIVA1O15304 175 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 POLR3GO15318 223 aaPredicted RBP-0.01□□□□□ -2.41
HPS3-205ENST00000478525 HYPMO75409 117 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 PGLYRP1O75594 196 aaPredicted RBP-0.01□□□□□ -2.41
HPS3-205ENST00000478525 SNAI1O95863 264 aaPredicted RBP-0.01□□□□□ -2.41
HPS3-205ENST00000478525 IGKV1D-12P01611 117 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 IGLV3-27P01718 113 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 PRH1P02810 166 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 BPGMP07738 259 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 TRGC1P0CF51 173 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 OR8G3PP0DMU2 310 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 LIPCP11150 499 aa-0.01□□□□□ -2.41
HPS3-205ENST00000478525 ANXA8P13928 327 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms