RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 J3QRE1 110 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 MYPOPQ86VE0 399 aaPredicted RBP12.15□□□□□ -0.46
NPHP4-208ENST00000478423 GCSAMQ8N6F7 178 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 RHBDL1O75783 438 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 GAPDHP04406 335 aaKnown RBP12.15□□□□□ -0.46
NPHP4-208ENST00000478423 FAM87AP0C7U9 286 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 STPG2Q8N412 459 aa12.15□□□□□ -0.46
NPHP4-208ENST00000478423 SPP1P10451 314 aa12.15□□□□□ -0.47
NPHP4-208ENST00000478423 GAMTQ14353 236 aa12.15□□□□□ -0.47
NPHP4-208ENST00000478423 TEPPQ6URK8 271 aa12.15□□□□□ -0.47
NPHP4-208ENST00000478423 CBLN2Q8IUK8 224 aa12.15□□□□□ -0.47
NPHP4-208ENST00000478423 TMEM18Q96B42 140 aa12.15□□□□□ -0.47
NPHP4-208ENST00000478423 TXN2Q99757 166 aa12.15□□□□□ -0.47
NPHP4-208ENST00000478423 TMEM167BQ9NRX6 74 aa12.15□□□□□ -0.47
NPHP4-208ENST00000478423 VAX2Q9UIW0 290 aa12.15□□□□□ -0.47
NPHP4-208ENST00000478423 RNF115Q9Y4L5 304 aa12.15□□□□□ -0.47
NPHP4-208ENST00000478423 MELTFP08582 738 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 WDYHV1Q96HA8 205 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 RSG1Q9BU20 258 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 SCNM1Q9BWG6 230 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 C1QTNF5Q9BXJ0 243 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 C7orf77A4D0Y5 90 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 PAGE4O60829 102 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 OR2A4O95047 310 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 S100A8P05109 93 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 GALR1P47211 349 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 LGALS7P47929 136 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 TUSC1Q2TAM9 212 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 ABLIM2Q6H8Q1 611 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 ZNRF1Q8ND25 227 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 ZNF596Q8TC21 504 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 GPR146Q96CH1 333 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 FAM210BQ96KR6 192 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 OR2A7Q96R45 310 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 MS4A7Q9GZW8 240 aaPredicted RBP12.14□□□□□ -0.47
NPHP4-208ENST00000478423 ZNF319Q9P2F9 582 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 PNRC1Q12796 327 aaPredicted RBP12.14□□□□□ -0.47
NPHP4-208ENST00000478423 PSG7Q13046 419 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 ZNF705AQ6ZN79 300 aaPredicted RBP12.14□□□□□ -0.47
NPHP4-208ENST00000478423 ZNF645Q8N7E2 425 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 LEAP2Q969E1 77 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 ZNF586Q9NXT0 402 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 COA4Q9NYJ1 87 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 OR51B2Q9Y5P1 312 aa12.14□□□□□ -0.47
NPHP4-208ENST00000478423 PINLYPA6NC86 204 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 LRRC3CA6NJW4 275 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 ZNF716A6NP11 495 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 HSBP1O75506 76 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 IGFBP3P17936 291 aaPredicted RBP12.13□□□□□ -0.47
NPHP4-208ENST00000478423 CSRP1P21291 193 aaKnown RBP12.13□□□□□ -0.47
NPHP4-208ENST00000478423 ZNF818PQ6ZRF7 136 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 MRGPRGQ86SM5 289 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 TCTEX1D1Q8N7M0 179 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 SIGLECL1Q8N7X8 197 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 SLC24A4Q8NFF2 622 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 SEC11CQ9BY50 192 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
NPHP4-208ENST00000478423 CTXND1A0A1B0GTU2 59 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 SMPD2O60906 423 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 S100A4P26447 101 aaKnown RBP12.13□□□□□ -0.47
NPHP4-208ENST00000478423 CD1BP29016 333 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 SSTR5P35346 364 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 DOLPP1Q86YN1 238 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 FAM103A1Q9BTL3 118 aaKnown RBP12.13□□□□□ -0.47
NPHP4-208ENST00000478423 PITX3O75364 302 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 OR52M1Q8NGK5 317 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 OR4X1Q8NH49 305 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 MANBALQ9NQG1 85 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 NAT8BQ9UHF3 227 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 HEATR5AQ86XA9 2040 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 ATXN7O15265 892 aaPredicted RBP12.13□□□□□ -0.47
NPHP4-208ENST00000478423 IGHV1-2P23083 117 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 IFITM2Q01629 132 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 C9orf106Q8NAJ2 232 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 OR10S1Q8NGN2 331 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 POM121Q96HA1 1249 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 TM2D1Q9BX74 207 aa12.13□□□□□ -0.47
NPHP4-208ENST00000478423 IGHV3-21A0A0B4J1V1 117 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 SULT1A2P50226 295 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 SERF2P84101 59 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 PDPNQ86YL7 162 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 HILPDAQ9Y5L2 63 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 TRAPPC1Q9Y5R8 145 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 IGKV1-9A0A0C4DH69 117 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 ACSF3Q4G176 576 aaPredicted RBP12.12□□□□□ -0.47
NPHP4-208ENST00000478423 RNF2Q99496 336 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 NPVFQ9HCQ7 196 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 DOCK10Q96BY6 2186 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 PTPRQQ9UMZ3 2332 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 CELA3BP08861 270 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 UCP3P55916 312 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 ERVFRD-1P60508 538 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 SPCS3P61009 180 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 TNFRSF19Q9NS68 423 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 SEMA5BQ9P283 1151 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
NPHP4-208ENST00000478423 NDUFA2O43678 99 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 GOSR1O95249 250 aa12.11□□□□□ -0.47
NPHP4-208ENST00000478423 MMP9P14780 707 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms