RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PATE3B3GLJ2 98 aa10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 K7EP34 96 aa10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 PRKNO60260 465 aaPredicted RBP10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 NDUFB2O95178 105 aa10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 LINC00869P0C866 280 aa10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 FMODQ06828 376 aa10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 ACKR1Q16570 336 aa10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 CLEC12BQ2HXU8 276 aa10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 TMEM164Q5U3C3 297 aa10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 GATSQ8NAP1 163 aa10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 OR13G1Q8NGZ3 307 aa10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 GMPPAQ96IJ6 420 aaPredicted RBP10.81□□□□□ -0.68
RTFDC1-207ENST00000477573 WDR87Q6ZQQ6 2873 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 CEBPZOSA8MTT3 80 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 IFNA5P01569 189 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 TAS2R46P59540 309 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 SHISA6Q6ZSJ9 500 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 ANKRD37Q7Z713 158 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 PRR22Q8IZ63 422 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 LGI3Q8N145 548 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 NINJ1Q92982 152 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 RAX2Q96IS3 184 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 TNFRSF13CQ96RJ3 184 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 CHRDL1Q9BU40 450 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 NPFFR1Q9GZQ6 430 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 ZNF665Q9H7R5 613 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 THYN1Q9P016 225 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 C19orf25Q9UFG5 118 aaPredicted RBP10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 HHLA2Q9UM44 414 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 PSG8Q9UQ74 426 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 IER3IP1Q9Y5U9 82 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 NCOR1O75376 2440 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 NUDT3O95989 172 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 C3orf79P0CE67 100 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 ADIPOQQ15848 244 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 ZNF74Q16587 644 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 COX19Q49B96 90 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 LINC01590Q5TEZ4 76 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 FAM78BQ5VT40 261 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 ASPHD2Q6ICH7 369 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 TMEM105Q8N8V8 129 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 ZNF441Q8N8Z8 693 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 LRTM2Q8N967 370 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 OR2I1PQ8NGU4 316 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 FBLN5Q9UBX5 448 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 DHDHQ9UQ10 334 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 MYO15AQ9UKN7 3530 aa10.8□□□□□ -0.68
RTFDC1-207ENST00000477573 MUC21A0A0G2JKD1 596 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 MUC21A0A140T8X8 626 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 PSMB11A5LHX3 300 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 CRYM-AS1A6NIL9 109 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 H0YJW9 148 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 XRCC2O43543 280 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 ZNF207O43670 478 aaKnown RBP10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 HLA-DRB1P01911 266 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 WNT2P09544 360 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 H2BFMP0C1H6 154 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 SSTR5P35346 364 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 MEF2BQ02080 365 aaPredicted RBP10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 RTP5Q14D33 572 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 MUC21Q5SSG8 566 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 LIAT1Q6ZQX7 453 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 CDC20BQ86Y33 519 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 KCNS1Q96KK3 526 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 PLEKHF2Q9H8W4 249 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 ST20Q9HBF5 79 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 SS18L2Q9UHA2 77 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 TMEM14AQ9Y6G1 99 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 PGCP20142 388 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 AMTP48728 403 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 POU3F1Q03052 451 aaPredicted RBP10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 FHL1Q13642 323 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 OR10J3Q5JRS4 329 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 CBLN3Q6UW01 205 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 ZNRF4Q8WWF5 429 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 NXT1Q9UKK6 140 aaKnown RBP10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 TRAPPC2LQ9UL33 140 aa10.79□□□□□ -0.68
RTFDC1-207ENST00000477573 KIAA2026Q5HYC2 2103 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 NTN3O00634 580 aaPredicted RBP10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 GYPAP02724 150 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 ZNF728P0DKX0 622 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 ALOX5APP20292 161 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 GRPRP30550 384 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 FOXI2Q6ZQN5 318 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 ZNF788Q6ZQV5 615 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 ULBP3Q9BZM4 244 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 WNT10AQ9GZT5 417 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 C11orf1Q9H5F2 150 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 YAE1D1Q9NRH1 226 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 CENPMQ9NSP4 180 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 OCIAD1Q9NX40 245 aa10.78□□□□□ -0.68
RTFDC1-207ENST00000477573 TRBV9A0A0B4J1U6 114 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 NUDT14O95848 222 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 ZNF883P0CG24 379 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 SEC11AP67812 179 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 HIST1H1AQ02539 215 aaPredicted RBP10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 AESQ08117 197 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 WDR38Q5JTN6 314 aa10.77□□□□□ -0.68
RTFDC1-207ENST00000477573 CPEB2Q7Z5Q1 589 aaKnown RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms