RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 OR6F1Q8NGZ6 308 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 ZNF418Q8TF45 676 aaPredicted RBP12.37□□□□□ -0.43
SEC13-215ENST00000477547 SECTM1Q8WVN6 248 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 GIMAP1Q8WWP7 306 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 RTN4IP1Q8WWV3 396 aaPredicted RBP12.37□□□□□ -0.43
SEC13-215ENST00000477547 ST6GALNAC6Q969X2 333 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 MOB3AQ96BX8 217 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 S1PR3Q99500 378 aa12.37□□□□□ -0.43
SEC13-215ENST00000477547 DISC1C4P0D8 188 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 GAPDHP04406 335 aaKnown RBP12.36□□□□□ -0.43
SEC13-215ENST00000477547 CD40LGP29965 261 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 PPP5CP53041 499 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 TUSC1Q2TAM9 212 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 SCGB2B2Q4G0G5 96 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 ZNF645Q8N7E2 425 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.36□□□□□ -0.43
SEC13-215ENST00000477547 OR56B4Q8NH76 319 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 C19orf24Q9BVV8 132 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 MRPL20Q9BYC9 149 aaKnown RBP12.36□□□□□ -0.43
SEC13-215ENST00000477547 SLC5A7Q9GZV3 580 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 GHITMQ9H3K2 345 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 ABCB10Q9NRK6 738 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 MCUBQ9NWR8 336 aa12.36□□□□□ -0.43
SEC13-215ENST00000477547 IGHV1-3A0A0C4DH29 117 aa12.35□□□□□ -0.43
SEC13-215ENST00000477547 M0R1X1 148 aa12.35□□□□□ -0.43
SEC13-215ENST00000477547 TIMM23O14925 209 aa12.35□□□□□ -0.43
SEC13-215ENST00000477547 LSAMPQ13449 338 aa12.35□□□□□ -0.43
SEC13-215ENST00000477547 DHRS11Q6UWP2 260 aa12.35□□□□□ -0.43
SEC13-215ENST00000477547 C5orf30Q96GV9 206 aa12.35□□□□□ -0.43
SEC13-215ENST00000477547 ZNF251Q9BRH9 671 aa12.35□□□□□ -0.43
SEC13-215ENST00000477547 MEGF9Q9H1U4 602 aa12.35□□□□□ -0.43
SEC13-215ENST00000477547 SDHAF2Q9NX18 166 aa12.35□□□□□ -0.43
SEC13-215ENST00000477547 BTBD17A6NE02 478 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 DNAJC9-AS1A6NH13 148 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 H3BUX3 64 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 HOXA3O43365 443 aaPredicted RBP12.34□□□□□ -0.43
SEC13-215ENST00000477547 IGHV4-59P01825 116 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 BRS3P32247 399 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 Q6YL49 198 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 MOB3BQ86TA1 216 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 DRAM1Q8N682 238 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 SSMEM1Q8WWF3 244 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 DEDD2Q8WXF8 326 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 SSX3Q99909 188 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 PRRT1Q99946 306 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 PRDM13Q9H4Q3 707 aa12.34□□□□□ -0.43
SEC13-215ENST00000477547 LINC00854A0A1B0GVQ3 168 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 OR5H14A6NHG9 310 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 VGLL3A8MV65 326 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 SLC22A5O76082 557 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 ZNF735P0CB33 412 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 HILS1P60008 231 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 BAMBIQ13145 260 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 AANATQ16613 207 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 AADACL3Q5VUY0 350 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 LHFPL1Q86WI0 220 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 OR51S1Q8NGJ8 323 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 CFHR4Q92496 578 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 TSC22D3Q99576 134 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 NABP2Q9BQ15 211 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 DPAGT1Q9H3H5 408 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 HRASLSQ9HDD0 168 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 CCL28Q9NRJ3 127 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 TNFRSF19Q9NS68 423 aa12.33□□□□□ -0.44
SEC13-215ENST00000477547 IGHV3-72A0A0B4J1Y9 119 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 TCF21O43680 179 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 PGAM2P15259 253 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 IER3P46695 156 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 DYNLT3P51808 116 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 MSMO1Q15800 293 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 GLDNQ6ZMI3 551 aaPredicted RBP12.32□□□□□ -0.44
SEC13-215ENST00000477547 IDO2Q6ZQW0 420 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 DRAXINQ8NBI3 349 aaPredicted RBP12.32□□□□□ -0.44
SEC13-215ENST00000477547 OR5R1Q8NH85 324 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 BORCS5Q969J3 196 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 DUX5Q96PT3 197 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 JMJD8Q96S16 334 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 SCP2D1Q9UJQ7 156 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 GAB2Q9UQC2 676 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 SVEP1Q4LDE5 3571 aa12.32□□□□□ -0.44
SEC13-215ENST00000477547 PROP1O75360 226 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 UPK1BO75841 260 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 IGLV2-14P01704 120 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 SNRNP70P08621 437 aaKnown RBP12.31□□□□□ -0.44
SEC13-215ENST00000477547 CD24P25063 80 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 RAB13P51153 203 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 HABP2Q14520 560 aaPredicted RBP12.31□□□□□ -0.44
SEC13-215ENST00000477547 LY6EQ16553 131 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 ZNF818PQ6ZRF7 136 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 KCTD9Q7L273 389 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 SLC38A6Q8IZM9 456 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 TERB2Q8NHR7 220 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 CAPSLQ8WWF8 208 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 ESM1Q9NQ30 184 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 VPREB3Q9UKI3 123 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 TCF19Q9Y242 345 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 POMT1Q9Y6A1 747 aa12.31□□□□□ -0.44
SEC13-215ENST00000477547 CENPXA8MT69 81 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 GPR31O00270 319 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms