RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 ST6GALNAC3Q8NDV1 305 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 BHLHE23Q8NDY6 225 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 OR5C1Q8NGR4 320 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 OR2AJ1Q8NGZ0 328 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 OR52N5Q8NH56 324 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 SGMS2Q8NHU3 365 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 MRPL30Q8TCC3 161 aaKnown RBP4□□□□□ -1.77
PTCD3-212ENST00000477520 RTN4IP1Q8WWV3 396 aaPredicted RBP4□□□□□ -1.77
PTCD3-212ENST00000477520 LINC00476Q8WZB0 136 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 KCNS1Q96KK3 526 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 SMIM14Q96QK8 99 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 GPER1Q99527 375 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 KLHDC3Q9BQ90 382 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 CCDC3Q9BQI4 270 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 ABHD14AQ9BUJ0 271 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 TTTY10Q9BZA0 68 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 ULBP2Q9BZM5 246 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 ZNF286AQ9HBT8 521 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 NRN1Q9NPD7 142 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 KCNIP1Q9NZI2 227 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 RNF7Q9UBF6 113 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 POLR1DQ9Y2S0 133 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 RNF115Q9Y4L5 304 aa4□□□□□ -1.77
PTCD3-212ENST00000477520 NINQ8N4C6 2090 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 CTXND1A0A1B0GTU2 59 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 MDFIC2A0A1B0GVS7 189 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 LOC107986453A0A1B0GWG9 222 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 A0A1W2PNV4 684 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 A0A1W2PQF6 199 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 NPIPB13A6NJU9 1138 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 NPIPB4C9JG80 1138 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 ZNF878C9JN71 531 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 H0YJW9 148 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 H3BRM9 83 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 TAX1BP3O14907 124 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 ZNF324O75467 553 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-212ENST00000477520 SRSF10O75494 262 aaKnown RBP3.99□□□□□ -1.77
PTCD3-212ENST00000477520 RAD51DO75771 328 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 TRAPPC6AO75865 159 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 SERF1AO75920 110 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 HAND1O96004 215 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 CGAP01215 116 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 IGHMP01871 453 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 HLA-DQA1P01909 254 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 ASAH2BP0C7U1 165 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 FTH1P19P0C7X4 201 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 GYPEP15421 78 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 PMCHP20382 165 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 TIMP3P35625 211 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 PI4KAP42356 2102 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 HINT1P49773 126 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-212ENST00000477520 GNG4P50150 75 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 LHX2P50458 406 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 ASCL1P50553 236 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 FOXL2P58012 376 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 KRTDAPP60985 99 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 CKS1BP61024 79 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 RUNX1Q01196 453 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 HIST1H1AQ02539 215 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-212ENST00000477520 FOXF2Q12947 444 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 SLAQ13239 276 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 TSTA3Q13630 321 aaPredicted RBP3.99□□□□□ -1.77
PTCD3-212ENST00000477520 TCEA2Q15560 299 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 LRRC75BQ2VPJ9 315 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 TDRG1Q3Y452 100 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 CCSMST1Q4G0I0 132 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 DCAF12Q5T6F0 453 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 WBP2NLQ6ICG8 309 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 ASPHD2Q6ICH7 369 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 UFSP1Q6NVU6 142 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 ASCL4Q6XD76 172 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 Q6ZS52 159 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 MRPL21Q7Z2W9 205 aaKnown RBP3.99□□□□□ -1.77
PTCD3-212ENST00000477520 Q8N976 141 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 ZNF740Q8NDX6 193 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 STXBP6Q8NFX7 210 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 OR4F17Q8NGA8 305 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 OR10AC1Q8NH08 325 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 LHX4Q969G2 390 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 MSI2Q96DH6 328 aaKnown RBP3.99□□□□□ -1.77
PTCD3-212ENST00000477520 RAX2Q96IS3 184 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 TSSK2Q96PF2 358 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 OR4F4Q96R69 305 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 WDR61Q9GZS3 305 aaKnown RBP3.99□□□□□ -1.77
PTCD3-212ENST00000477520 ZMAT3Q9HA38 289 aaKnown RBP3.99□□□□□ -1.77
PTCD3-212ENST00000477520 LYRM4Q9HD34 91 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 KCNIP2Q9NS61 270 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 RPRMQ9NS64 109 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 SLC7A10Q9NS82 523 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 PLEKHJ1Q9NW61 149 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 IL36BQ9NZH7 164 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 ABI3Q9P2A4 366 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 DKK2Q9UBU2 259 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 B4GALT6Q9UBX8 382 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 TRAPPC2LQ9UL33 140 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 PLXNB3Q9ULL4 1909 aa3.99□□□□□ -1.77
PTCD3-212ENST00000477520 ZNF318Q5VUA4 2279 aa3.98□□□□□ -1.77
PTCD3-212ENST00000477520 ABCA7Q8IZY2 2146 aa3.98□□□□□ -1.77
PTCD3-212ENST00000477520 CABIN1Q9Y6J0 2220 aa3.98□□□□□ -1.77
PTCD3-212ENST00000477520 TRAV38-1A0A0B4J264 116 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms