RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 SNAP25P60880 206 aa2.56□□□□□ -2
VPS50-212ENST00000476413 CXCR4P61073 352 aa2.56□□□□□ -2
VPS50-212ENST00000476413 FABP5Q01469 135 aa2.56□□□□□ -2
VPS50-212ENST00000476413 MLLT11Q13015 90 aaPredicted RBP2.56□□□□□ -2
VPS50-212ENST00000476413 ZNF181Q2M3W8 571 aa2.56□□□□□ -2
VPS50-212ENST00000476413 C1orf174Q8IYL3 243 aa2.56□□□□□ -2
VPS50-212ENST00000476413 Q8N402 240 aa2.56□□□□□ -2
VPS50-212ENST00000476413 OR10A6Q8NH74 314 aa2.56□□□□□ -2
VPS50-212ENST00000476413 Q8WTZ3 238 aa2.56□□□□□ -2
VPS50-212ENST00000476413 TUBA4BQ9H853 241 aa2.56□□□□□ -2
VPS50-212ENST00000476413 TRAV8-1A0A0A6YYK1 113 aa2.55□□□□□ -2
VPS50-212ENST00000476413 IGHV3-73A0A0B4J1V6 119 aa2.55□□□□□ -2
VPS50-212ENST00000476413 DHRS12A0PJE2 317 aa2.55□□□□□ -2
VPS50-212ENST00000476413 M0R381 172 aa2.55□□□□□ -2
VPS50-212ENST00000476413 ZNF189O75820 626 aaPredicted RBP2.55□□□□□ -2
VPS50-212ENST00000476413 PSMG1O95456 288 aa2.55□□□□□ -2
VPS50-212ENST00000476413 C8orf88P0DMB2 117 aa2.55□□□□□ -2
VPS50-212ENST00000476413 CPMP14384 443 aa2.55□□□□□ -2
VPS50-212ENST00000476413 SLC25A16P16260 332 aa2.55□□□□□ -2
VPS50-212ENST00000476413 ZNF7P17097 686 aaPredicted RBP2.55□□□□□ -2
VPS50-212ENST00000476413 NPPCP23582 126 aa2.55□□□□□ -2
VPS50-212ENST00000476413 CA7P43166 264 aa2.55□□□□□ -2
VPS50-212ENST00000476413 LPAR6P43657 344 aa2.55□□□□□ -2
VPS50-212ENST00000476413 RPS24P62847 133 aaKnown RBP2.55□□□□□ -2
VPS50-212ENST00000476413 ZNF322Q6U7Q0 402 aaPredicted RBP2.55□□□□□ -2
VPS50-212ENST00000476413 ERMNQ8TAM6 284 aa2.55□□□□□ -2
VPS50-212ENST00000476413 HAVCR2Q8TDQ0 301 aa2.55□□□□□ -2
VPS50-212ENST00000476413 DRC3Q9H069 523 aa2.55□□□□□ -2
VPS50-212ENST00000476413 NKIRAS1Q9NYS0 192 aa2.55□□□□□ -2
VPS50-212ENST00000476413 ADAMTS7Q9UKP4 1686 aa2.55□□□□□ -2
VPS50-212ENST00000476413 VPS37CA5D8V6 355 aaPredicted RBP2.54□□□□□ -2
VPS50-212ENST00000476413 C17orf51A8MQB3 221 aa2.54□□□□□ -2
VPS50-212ENST00000476413 CRTAPO75718 401 aaPredicted RBP2.54□□□□□ -2
VPS50-212ENST00000476413 TYMSP04818 313 aa2.54□□□□□ -2
VPS50-212ENST00000476413 GZMHP20718 246 aa2.54□□□□□ -2
VPS50-212ENST00000476413 GABRA4P48169 554 aa2.54□□□□□ -2
VPS50-212ENST00000476413 RWDD2BP57060 319 aa2.54□□□□□ -2
VPS50-212ENST00000476413 KRTAP12-3P60328 96 aa2.54□□□□□ -2
VPS50-212ENST00000476413 GNA13Q14344 377 aa2.54□□□□□ -2
VPS50-212ENST00000476413 JOSD1Q15040 202 aaPredicted RBP2.54□□□□□ -2
VPS50-212ENST00000476413 CDKL4Q5MAI5 379 aa2.54□□□□□ -2
VPS50-212ENST00000476413 OR4C16Q8NGL9 310 aa2.54□□□□□ -2
VPS50-212ENST00000476413 FNDC9Q8TBE3 224 aa2.54□□□□□ -2
VPS50-212ENST00000476413 TMBIM1Q969X1 311 aa2.54□□□□□ -2
VPS50-212ENST00000476413 MGLLQ99685 303 aa2.54□□□□□ -2
VPS50-212ENST00000476413 LRRC19Q9H756 370 aa2.54□□□□□ -2
VPS50-212ENST00000476413 PCYT1BQ9Y5K3 369 aaPredicted RBP2.54□□□□□ -2
VPS50-212ENST00000476413 ATP6V0CP27449 155 aa2.53□□□□□ -2
VPS50-212ENST00000476413 CDC34P49427 236 aaPredicted RBP2.53□□□□□ -2
VPS50-212ENST00000476413 BLVRAP53004 296 aa2.53□□□□□ -2
VPS50-212ENST00000476413 PPP1R1AQ13522 171 aa2.53□□□□□ -2
VPS50-212ENST00000476413 EBPQ15125 230 aaKnown RBP2.53□□□□□ -2
VPS50-212ENST00000476413 CST9Q5W186 159 aa2.53□□□□□ -2
VPS50-212ENST00000476413 EEF1AKMT1Q8WVE0 214 aa2.53□□□□□ -2
VPS50-212ENST00000476413 PSORS1C2Q9UIG4 136 aa2.53□□□□□ -2
VPS50-212ENST00000476413 SNX12Q9UMY4 172 aa2.53□□□□□ -2
VPS50-212ENST00000476413 A0A0J9YX75 114 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 ZNF878C9JN71 531 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 SLC17A3O00476 420 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 GSTZ1O43708 216 aaPredicted RBP2.52□□□□□ -2.01
VPS50-212ENST00000476413 CD36P16671 472 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 CRHBPP24387 322 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 SERPINB10P48595 397 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 TAS2R45P59539 299 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 HLA-DRB3P79483 266 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 NAA40Q86UY6 237 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 C16orf78Q8WTQ4 265 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 RNASE6Q93091 150 aaKnown RBP2.52□□□□□ -2.01
VPS50-212ENST00000476413 CPNE2Q96FN4 548 aaPredicted RBP2.52□□□□□ -2.01
VPS50-212ENST00000476413 NKX6-2Q9C056 277 aaPredicted RBP2.52□□□□□ -2.01
VPS50-212ENST00000476413 MAP1LC3AQ9H492 121 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 EMC3Q9P0I2 261 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 SLIT2O94813 1529 aa2.52□□□□□ -2.01
VPS50-212ENST00000476413 ARHGAP32A7KAX9 2087 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 TMED7-TICAM2A0A0A6YYA0 188 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 PFDN6O15212 129 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 DEXIO95424 95 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 MAGEA2P43356 314 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 CTBP2P56545 445 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 SS18Q15532 418 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 LGALS9CQ6DKI2 356 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 TMEM161BQ8NDZ6 487 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 OR2D3Q8NGH3 330 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 OR52B2Q96RD2 323 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 MYO9BQ13459 2157 aa2.51□□□□□ -2.01
VPS50-212ENST00000476413 NYNRINQ9P2P1 1898 aaKnown RBP2.5□□□□□ -2.01
VPS50-212ENST00000476413 C5orf49A4QMS7 147 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 H0Y980 276 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 M0QZ92 97 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 CXCR6O00574 342 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 SSNA1O43805 119 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 REG1AP05451 166 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 OCM2P0CE71 109 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 CSRP1P21291 193 aaKnown RBP2.5□□□□□ -2.01
VPS50-212ENST00000476413 TMEM33P57088 247 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 TMEM176BQ3YBM2 270 aaPredicted RBP2.5□□□□□ -2.01
VPS50-212ENST00000476413 TMEM31Q5JXX7 168 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 C2orf91Q6ZV80 131 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 ZNF767PQ75MW2 155 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms